Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2189 ATGTGTGTTTTAGGAGCCTTGGTTACGACTTTGAGGAGAGCAAATGTTGATCCATCACTTGTGCAAGAGGTGTTTTTTTGGAAGGTTCTTAGTGCAAATTTAGGGCAGGCTCCTGCTAGACAGGCTGCATTAGGTGCTGGAATACCTACATCTGTTATCTGTACTACTATTAACAAGGTCTGTTCATCTGGGATCAAAGTTACCAAGTTAGCAGCACAAACCATTCAGTTGGGTTCCAATGATGTTGTTGTGGAAGAAGCTTCTGCTATCAAGGCGGCAGGAAAAGCATGGTATCATACTATGGTGTCAGATTCTGATTACACAGAATTTGATAACTTCTCCAAATGGACTCTTATGCCATTCAAAGCTTTGAGAAAGGGATATCTGCACAAAATGGTGGTCATTTTGCTTGGGAGATTAGTTCCGGTTGAAATTTTCATTGGAAGAGGAAAGCCTTCTACACTAGTACACTAA 474 0.4114 MCVLGALVTTLRRANVDPSLVQEVFFWKVLSANLGQAPARQAALGAGIPTSVICTTINKVCSSGIKVTKLAAQTIQLGSNDVVVEEASAIKAAGKAWYHTMVSDSDYTEFDNFSKWTLMPFKALRKGYLHKMVVILLGRLVPVEIFIGRGKPSTLVH* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2189 157 Pfam Thiolase, N-terminal domain 8 84 IPR020616 GO:0016747
Mal8g2189 157 Gene3D - 2 124 IPR016039 GO:0016746
Mal8g2189 157 SUPERFAMILY Thiolase-like 6 84 IPR016039 GO:0016746
Mal8g2189 157 PANTHER ACETYL-COA C-ACYLTRANSFERASE 6 85 - -
Mal8g2189 157 PANTHER PEROXISOMAL ACETOACETYL-COENZYME A THIOLASE 6 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2189 Mal-Chr8 46644918 46646890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2189 82 116 Cytoplasmic Ribosomal Protein Gene Family AT5G02870 82.857 2.82e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2189 K00626 - qsu:112015380 134.42