Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2179 ATGTCTCTACCAAGGTTAGGAATAGGTGATGAGGAAAGTAAAAGCAATGTTACTATGTTGGAAAAAAGTGTGCATTTGAATGGTTCAAAACCAAAAGAGTTTAATTACATGGGATTATCATCATCTAATTGTTCATTAGTGGATAGTTCAGTTCCAAAAATTTCATCTTTTAGTGATGAGAGCAAAAGTAATTTGAATCTTAAAGCTACTGAGCTTAGATTGGGACTTCCAGGATCACTTTCTCCTGAAAGAGATTCTTCTGATTTTTGTTTGAGGGGTTCGAAGCAGTTCGATGAAAAGCCTCTTTTTCCTTTGCATCCTCAAAAAGATGATCATCTTTTTGAATCTAAGCCTGCTGTTTTAGGTAACAAAAGAGGGTTTTCTGATGCAATGAATGTTTTCTCAGAGGGGAAATTGAAGCCTAGCTCCAAAATGCTTGAGAATGTTGCGGCGCAGAAAGTGAAAGCCGATGAAATAGCAACAGTTAAGGTTGGTGTTGAGAGGCCTAATGGTGTCGGTGAAAGCAGACCAAATCTTAATGGTTCGGCAAATAATGGAAATAGCATTGCACCAGCTACCAAGGCACAGGTTGTTGGTTGGCCTCCAATAAGATCATTTCGGAAAAATTCATTGACAACTGCTTCAAAGAACATTGAAGAGGTTGATGGAAAATTGGGATCAGGAGGTGCCGTGTTCGTGAAGGTTAGCATGGATGGTGCTCCTTATTTGAGAAAAGTAGACTTGAAGAACTACACTGCATATTCAGAACTATCTTCTTCTCTTGAGAAGATGTTCAGTTGTTTCACCATAGGTCAATGTGAATCTCATGGAAATCAGATGTTGAATGAAACCAAGCTGAGGGATCTGCTTCATGGGTCAGAATATGTTATTACTTATGAGGATAAAGATGGTGATTGGATGCTTGTGGGTGATGTTCCCTGGGAGATGTTTATTGATACATGCAGGAGGTTAAGAATCATGAAGAGTTCTGATGCCATTGGTCTAGCCCCTAGAGCAGTTGAAAAAAGTAAAAGCAGGAACTAA 1044 0.3908 MSLPRLGIGDEESKSNVTMLEKSVHLNGSKPKEFNYMGLSSSNCSLVDSSVPKISSFSDESKSNLNLKATELRLGLPGSLSPERDSSDFCLRGSKQFDEKPLFPLHPQKDDHLFESKPAVLGNKRGFSDAMNVFSEGKLKPSSKMLENVAAQKVKADEIATVKVGVERPNGVGESRPNLNGSANNGNSIAPATKAQVVGWPPIRSFRKNSLTTASKNIEEVDGKLGSGGAVFVKVSMDGAPYLRKVDLKNYTAYSELSSSLEKMFSCFTIGQCESHGNQMLNETKLRDLLHGSEYVITYEDKDGDWMLVGDVPWEMFIDTCRRLRIMKSSDAIGLAPRAVEKSKSRN* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2179 347 Gene3D - 226 341 - -
Mal8g2179 347 SUPERFAMILY CAD & PB1 domains 226 328 - -
Mal8g2179 347 MobiDBLite consensus disorder prediction 168 188 - -
Mal8g2179 347 PANTHER AUXIN-INDUCED PROTEIN 19 341 - -
Mal8g2179 347 ProSiteProfiles PB1 domain profile. 230 329 IPR000270 GO:0005515
Mal8g2179 347 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 19 341 IPR003311 GO:0005634|GO:0006355
Mal8g2179 347 Pfam AUX/IAA family 70 338 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2179 Mal-Chr8 46497396 46499767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2179 219 337 B3 DNA Binding Superfamily AT4G23980 30.252 3.30e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mal8g2179 AUX_IAA 5.8e-86 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2179 K14484 - gmx:100815447 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2179 8 46497396 46499767 Mal8g2179 8 46497396 46499767 ECH