Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2163 ATGGAAGAGGTCATGAATTTTCTTATGCGTGCTTTTGATTTGGCTAAAAAATTTGAACTAGAACTACCCAACATGGCCAACCACCCTGAAATACTATTTTCATCTATTGATGAGGTTGAAAAAGCATTTAGTGTTGCCAAAGAAAGATTAATGATGATGTTGTCATCACAACATGACACAACAACAACAACACCTTCTAATACCTTTGCTCAAATTCTGTCTCATGATTTTTTCATGCAAAAAACTCAACATGCTCAAATGGGTGGAAGTGAAACTTCAATGCATGCACATTCAATGGATCAATTGTTTCTAATGCAAAACCCTTTTGATGTGAGTGTTTTGCTTGAGAATAAGGTGATAAGTGGTGGTGATGTTGAGTTGTTAAAATCTAGGGGAACTTTGAGGATTGGTGAAATGGGTGGGAGGGATGTAAAAGGTTTAGAAGGAGATCAAATGCAAGGAATAGAAACACCATCTTCAAGACGAAAAAAATGCAGGAAGAATGATGTGGAGAAGAGAACAGAAATGTTTCCTGCACCTCAGATTGGAAACACTGAAATGCCACCAGAAGATGGCTTCACTTGGAGAAAATATGGCCAGAAAGAGATACTTGGCCGCAAGCACCCAAGGAGTTACTATAGGTGCACACACCAAAAATTATATTTGTGTCCAGCAAAAAAGCAAGTACAAAGACTTGATGACAATCCTAACATAGTTGAAGTAACATATAGAGGTGAACACATTTGTCACAAATCCTTAACAGCACCATCATCATATCCACCACCACCAAACCTACTTGTGAACATTAGTACTAATCAAACTACCATTCCTTCCGAACGGTGGCCATCCGCGGTGAACCTCAACCTCAGGGGCGGAGACGGTAGTGGTGGACCCTCAACTTCAAGATTCGGAATTGATTATCCGGTAGCCGATATGGCTGATGCAATGTTCAACTCAGGTAGTAGCAGTGGCAATAGTATGGAATCGCTCTTTTATCCAACTGAAGATAAATGGGAACCTGATGAGAAGAAAAATTGA 1038 0.3979 MEEVMNFLMRAFDLAKKFELELPNMANHPEILFSSIDEVEKAFSVAKERLMMMLSSQHDTTTTTPSNTFAQILSHDFFMQKTQHAQMGGSETSMHAHSMDQLFLMQNPFDVSVLLENKVISGGDVELLKSRGTLRIGEMGGRDVKGLEGDQMQGIETPSSRRKKCRKNDVEKRTEMFPAPQIGNTEMPPEDGFTWRKYGQKEILGRKHPRSYYRCTHQKLYLCPAKKQVQRLDDNPNIVEVTYRGEHICHKSLTAPSSYPPPPNLLVNISTNQTTIPSERWPSAVNLNLRGGDGSGGPSTSRFGIDYPVADMADAMFNSGSSSGNSMESLFYPTEDKWEPDEKKN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2163 345 ProSiteProfiles WRKY domain profile. 190 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g2163 345 PANTHER WRKY TRANSCRIPTION FACTOR 55 1 262 - -
Mal8g2163 345 Pfam WRKY DNA -binding domain 190 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g2163 345 SUPERFAMILY WRKY DNA-binding domain 186 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g2163 345 SMART WRKY_cls 189 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g2163 345 MobiDBLite consensus disorder prediction 321 345 - -
Mal8g2163 345 Gene3D WRKY domain 179 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g2163 345 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 262 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2163 Mal-Chr8 45989198 45993198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2163 1 331 WRKY Transcription Factor Family AT2G40740 36.873 1.23e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal8g2163 WRKY 5.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2163 - - mtr:MTR_5g067680 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2163 8 45989198 45993198 Mal8g2163 8 45989198 45993198 ECH