Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2161 ATGGATAATAATATCCTTGAAAGTGTGAAAAAGAGAGTTATAATCAAAGAACTTGTTAAGGGTCAAGAAGCTGCAACCAAACTCAAGATTGTTCTTCAGAATGAGAATCCCTTTGAAGCTGATCATCTTGCTGCAAGTGTGCTCAGATCTTTCACTCAAGCTCTTTCTATTATCTCTCAACCCGGTTGTGAAGATTCTATTACTGATAGTAGGAAGAAGGGAAGAAGAGGTTGCTACAAAAGAAGGAAGAGTGCAGCTGAGGTATGGACCATAGTTTCCCATACCATTGTTGATAATCATTCATGGAGAAAGTACGGACAGAAGGAAATCCTGAATTCTGAATTTCCTAGGAGTTACTTCAGGTGCTCACATAAAGATGATCAAGGTTGCTTAGCAACCAAACAGGTGCAAAAGACAAATGAGAATCCTGACATGTATCAAACTACATACATTGGCCTCCACACATGCAACACCACTCCTAAACCAAGTACATCTAATGAGCCAATATTTCTTGCGAATTCTGAATCTGAAGTGACACCAACACCAAGATTAACTATAAAACAAGAATATCCCAAAGAAGAAACTCCGAGTAATGTCATGGAATCTGATGATAATACAGATGATGTGCTACTGTTTCAAGATCTGGCACTGGAATTTGGGGACATTGAATTCCACTTTGATGAAAATTAA 690 0.3826 MDNNILESVKKRVIIKELVKGQEAATKLKIVLQNENPFEADHLAASVLRSFTQALSIISQPGCEDSITDSRKKGRRGCYKRRKSAAEVWTIVSHTIVDNHSWRKYGQKEILNSEFPRSYFRCSHKDDQGCLATKQVQKTNENPDMYQTTYIGLHTCNTTPKPSTSNEPIFLANSESEVTPTPRLTIKQEYPKEETPSNVMESDDNTDDVLLFQDLALEFGDIEFHFDEN* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2161 229 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 6 203 - -
Mal8g2161 229 Gene3D WRKY domain 79 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g2161 229 SUPERFAMILY WRKY DNA-binding domain 93 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g2161 229 SMART WRKY_cls 96 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g2161 229 Pfam WRKY DNA -binding domain 98 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g2161 229 ProSiteProfiles WRKY domain profile. 98 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g2161 229 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 6 203 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2161 Mal-Chr8 45936801 45953066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2161 1 229 WRKY Transcription Factor Family AT3G56400 37.847 1.26e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal8g2161 WRKY 8.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2161 - - mtr:MTR_5g067700 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1627 2 19631800 19633831 Mal8g2161 8 45936801 45953066 ECH
Mal8g2161 8 45936801 45953066 Mal8g2161 8 45936801 45953066 ECH
Mal8g2161 8 45936801 45953066 Mal2g1627 2 19631800 19633831 PCT