Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2160 ATGGAACCACATCTGAATGCAGCCTCCATTCTGAGAACCAGCAGGAACATACCATATTCTTGTCTTCCTCAACCATTCCTGTCTCTTACTACAAGGATGCTATCCTCTTCACCATCATCTTCTTCATCAACCCCTTCATCTGAAACAAAAATAGGTTACTCTTCTTCAAACCCTAAACCTTCATTCAAGAACCTTTCGTTATTCTCCAACAATCATTCTCTTCAAAGCATGACGCTTTCTAAGTGTTTCTCTCACTCTGGACCATCTAATGCAAAACCCATTTCTGAATTGGTTGAATCTGGTGAATTGGAGTCTCTTGTTGTGGTTTCGTTTTATAAGTTTGCGGATTTTCCTGATCATGCTGTTTTGCGTGTGCCCTTGAAGCAACTGTGTCAACAATTGCGTGTTTCAGGCGGTATCATTCTAGCACCTGAAGGAATTAATGGTAGTTTATGTGGCACACGGGAGTCAGTGGAGAAAGTTCTTGCATTTATTCAGAGTGATGATCGCCTGAAGGGACTAAGACGTATTGAATCGCCTGTCAGTCCTGAGGAGGAGGCCATACATGAAGGTCATCATGGACACAGTGCCAGTTCTCCCCTTGCTGCTGGGGAAGATGCACCTTTCCGATGGGATCATGTGAGAGTCAAGTTGAAGAAAGAGATTGTCACTCTTGGAATGCCTACTATATCACCTATTGAAAGAGTTGGAAAATATGTTGGCCCAAAAGAATGGAATTCTTTGATCAGTGATCCTGATACAGTTGTGATCGACGTGCGGAACAACTATGAAACCAGAATAGGAAAGTTTAAAGGAGCAGTTGATCCTTGTACGGTATCATTTCGTGAATTCCCATCTTGGGTGGAGGAATGTTTCCAGCTTATGAGAAGAGATGCTGAGCATCCAAAAGATGATGTAAACCATTCAGACCAAAGTGCTGAAAAAGAAACGGAGAATCCAAAACAACATTTGCCACGTGTTGCAATGTATTGCACCGGGGGTATTCGATGTGAGAAAGCTTCGAGTCTACTCCTCAGCAAAGGTTTCAAAGAGGTTTATCACCTGGAAGGTGGAATTCTGAAATATCTTGAGGAGGTTCCAGAGAGAAAAAGTCTCTGGGAGGGAGAGTGCTTTGTTTTTGACAAGCGAGTCTCCGTCGAGCATGGTTTGGCACAAGGAAATTTCAAGCTGTGCTATGGTTGTAAGCAGCCTGTAAGTGATGCTGACATGGAATCCCCAGAATATGAATACGGAGTTTCCTGTCCTTACTGTTTTGCACAGAAATCAGAAGAAGAAAAGGAGAGAGCTCGAGCTCGACAAAAACAATTTGAGAGATGGGGAATCATAGGTGGTCCTGATAAGGGCCGCCGGCCGACACGTGAACAGAACAGTGCTAGCAGGGATCAAGATCAACTTTCGAAGTCTGTTTAA 1431 0.4354 MEPHLNAASILRTSRNIPYSCLPQPFLSLTTRMLSSSPSSSSSTPSSETKIGYSSSNPKPSFKNLSLFSNNHSLQSMTLSKCFSHSGPSNAKPISELVESGELESLVVVSFYKFADFPDHAVLRVPLKQLCQQLRVSGGIILAPEGINGSLCGTRESVEKVLAFIQSDDRLKGLRRIESPVSPEEEAIHEGHHGHSASSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTISPIERVGKYVGPKEWNSLISDPDTVVIDVRNNYETRIGKFKGAVDPCTVSFREFPSWVEECFQLMRRDAEHPKDDVNHSDQSAEKETENPKQHLPRVAMYCTGGIRCEKASSLLLSKGFKEVYHLEGGILKYLEEVPERKSLWEGECFVFDKRVSVEHGLAQGNFKLCYGCKQPVSDADMESPEYEYGVSCPYCFAQKSEEEKERARARQKQFERWGIIGGPDKGRRPTREQNSASRDQDQLSKSV* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2160 476 Hamap tRNA uridine(34) hydroxylase [trhO]. 104 408 IPR020936 -
Mal8g2160 476 MobiDBLite consensus disorder prediction 302 321 - -
Mal8g2160 476 MobiDBLite consensus disorder prediction 36 57 - -
Mal8g2160 476 MobiDBLite consensus disorder prediction 435 476 - -
Mal8g2160 476 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 219 396 IPR036873 -
Mal8g2160 476 Pfam Rhodanese-like domain 243 364 IPR001763 -
Mal8g2160 476 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 104 457 IPR020936 -
Mal8g2160 476 Gene3D - 96 223 - -
Mal8g2160 476 MobiDBLite consensus disorder prediction 450 464 - -
Mal8g2160 476 CDD RHOD_YceA 237 364 - -
Mal8g2160 476 SMART rhod_4 240 368 IPR001763 -
Mal8g2160 476 Pfam UPF0176 acylphosphatase like domain 107 222 IPR040503 -
Mal8g2160 476 MobiDBLite consensus disorder prediction 182 202 - -
Mal8g2160 476 ProSiteProfiles Rhodanese domain profile. 250 371 IPR001763 -
Mal8g2160 476 Gene3D - 224 406 IPR036873 -
Mal8g2160 476 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 104 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2160 Mal-Chr8 45919886 45924614 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2160 91 464 Sulfurtransferasese or Rhodanese AT2G40760 74.674 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2160 - - mtr:MTR_5g067730 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2160 8 45919886 45924614 Mal8g2160 8 45919886 45924614 ECH