Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2127 ATGAGGTTTCAATTCTTCATTGCTCCATTTTTTCTTCTAAGCTTCATATCATCTCTCTTAAACTTGACTCTAGCTGACTTAAACTCAGACAAAAATTCTCTCCTTGAATTCTCTTCTACTCTCCCACTTTCCTCAAGATTCAACTGGAATAACTCAATTCCAATTTGCACTTCATGGATTGGTATAACTTGCAACCAAAATGAAACTAATGTCATAAGCATCCATCTTCCAGGAATTGGATTAAAGGGAACCATTCCAAACAACAGCAGCTTAGGAAAACTTGATTCCCTTAAAATACTAAGCCTTCATTTCAATGAACTTAGTGGAAATCTACCTTCTAACATTCTCTCTATTCCTTCTCTTCAATATGTTAATCTTCAACACAATAATTTCACAGGCCTAATCCCTTCTATCTCCTCAAAACTCATTGCATTGGATCTTTCCTTTAACCTTCCTAAGCTCAAATACTTGAATTTGAGTTATAATAACTTGAATGGTTCAATTCCATCTTCTATTAATCATTTCCCTTACAGTTCTTTTATTGGAAATTCTCTCTTATGTGGTTCACTTCTCAATCATTGTTCTAAAATCTCTCCCTATCCTTCTCCTTCTCCATCTCCATCACCTACTCCATCAACTACTCAAAATCAAAAGGCTACAACTTCAAAGAAATTATTCGGAACCGCTTCAATACTTGCTTTAGCAATAGGAGGCATAGCCTTTCTTTCTCTCCTAGTTTTAGTGATCTTTGTGTGCTTTTTAAAGAGGAGAAGGAGTAAAAGCAGTGATGATATATCGAAAGGAAAGGCGAAGACTGAGGATTCAATTTCGAAGAGTTTTGGAAGTGGAGTGTTGGAGGGTGAAAGTAACAAATTGTTTTTCTTTGAAGGTTGTTCTTATAGCTTTGACCTTGAAGATTTGTTGAAGGCTTCAGCTGAAGTACTTGGAAAAGGAAGCTATGGAACAACATATAAGGCTGCATTGGAGGAAGGAATAATTGTGGTGGTTAAAAGGTTGAAGGAAGTTGTGGTTGGAAAGAAGGAGTTTGAGCAACAGATGGAGGCTGTTGGAAGAATTGGAAGATATTCCAATATCATACCTCTAAGAGCTTATTACTATTCCAAAGATGAGAAACTTCTTGTTTATGACTACATGCTTGGTGGAAGCTTGTTTTCATTACTTCATGGAAACAAGGGTGAAGGAAGAACTCCATTAAGCTGGAATTCAAGAATGAAGATTGCACTAGGAGCTGCCAAAGGAATTTCTTCCATTCACACAGAGGGAGGTCCAAAATTTATTCATGGCAACATCAAGTCAACAAATGTACTCATAACACAAGAGCTTGATGGTTGTATTGCTGATGTTGGACTTACTCCCCTTATGAACATCTCATCAACCATGTCAAGATCCAATGGATACCGAGCTCCAGAAGTAAACGAATCAAGGAAAATCGCCGCTCAGAAGAGTGATGTTTACAGCTTTGGTGTACTCCTTCTTGAAATGCTTACAGGGAAGACTCCATTAGGATATTCTGGTTATGATCATGACATGGTTGATCTTCCAAGGTGGGTAAGCTCGGTGGTTCGCGAGGAATGGACGGCTGAAGTTTTCGATGAGGAGATGATTAGAGGTGGAGAATATGTTGAAGAGGAGATGGTGCGGATGCTTCAGATCGCACTTTCTTGTGTGTCAAAGGTGGTAGATAATAGGCCAACAATGGATGAAGTTGTTGGAAACATAGTGGAAATTATGCAGCCTGAGTTGAAGAAAAGTACAACATCTTCTGAGTCTGAATCTAATGTATAA 1806 0.3815 MRFQFFIAPFFLLSFISSLLNLTLADLNSDKNSLLEFSSTLPLSSRFNWNNSIPICTSWIGITCNQNETNVISIHLPGIGLKGTIPNNSSLGKLDSLKILSLHFNELSGNLPSNILSIPSLQYVNLQHNNFTGLIPSISSKLIALDLSFNLPKLKYLNLSYNNLNGSIPSSINHFPYSSFIGNSLLCGSLLNHCSKISPYPSPSPSPSPTPSTTQNQKATTSKKLFGTASILALAIGGIAFLSLLVLVIFVCFLKRRRSKSSDDISKGKAKTEDSISKSFGSGVLEGESNKLFFFEGCSYSFDLEDLLKASAEVLGKGSYGTTYKAALEEGIIVVVKRLKEVVVGKKEFEQQMEAVGRIGRYSNIIPLRAYYYSKDEKLLVYDYMLGGSLFSLLHGNKGEGRTPLSWNSRMKIALGAAKGISSIHTEGGPKFIHGNIKSTNVLITQELDGCIADVGLTPLMNISSTMSRSNGYRAPEVNESRKIAAQKSDVYSFGVLLLEMLTGKTPLGYSGYDHDMVDLPRWVSSVVREEWTAEVFDEEMIRGGEYVEEEMVRMLQIALSCVSKVVDNRPTMDEVVGNIVEIMQPELKKSTTSSESESNV* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2127 601 ProSiteProfiles Leucine-rich repeat profile. 153 175 IPR001611 GO:0005515
Mal8g2127 601 PANTHER OS05G0588300 PROTEIN 6 150 - -
Mal8g2127 601 PANTHER OS05G0588300 PROTEIN 149 601 - -
Mal8g2127 601 ProSiteProfiles Protein kinase domain profile. 309 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2127 601 SUPERFAMILY L domain-like 40 178 - -
Mal8g2127 601 Pfam Protein kinase domain 313 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g2127 601 MobiDBLite consensus disorder prediction 200 219 - -
Mal8g2127 601 Gene3D Ribonuclease Inhibitor 144 195 IPR032675 -
Mal8g2127 601 Gene3D Phosphorylase Kinase; domain 1 277 384 - -
Mal8g2127 601 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Mal8g2127 601 Gene3D Ribonuclease Inhibitor 25 143 IPR032675 -
Mal8g2127 601 PANTHER LRR RECEPTOR-LIKE KINASE 6 150 - -
Mal8g2127 601 PANTHER LRR RECEPTOR-LIKE KINASE 149 601 - -
Mal8g2127 601 ProSitePatterns Protein kinases ATP-binding region signature. 315 346 IPR017441 GO:0005524
Mal8g2127 601 SUPERFAMILY Protein kinase-like (PK-like) 313 578 IPR011009 -
Mal8g2127 601 Gene3D Transferase(Phosphotransferase) domain 1 385 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2127 Mal-Chr8 44523963 44526127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2127 6 586 Receptor kinase-like Gene Family AT3G08680 53.226 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal8g2127 Pkinase 4.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2127 - - cam:101501552 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2127 8 44523963 44526127 Mal2g1635 2 19712612 19714916 PCT