Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2087 ATGAACTTTTCTGGTACCTTAACAAAACCCATTTTTCCATTTTCACAAACAGAAATGCCAATTCTAACATTTGGTCATTCTAAGTTAAGTGCTGCTACAATAGCTCTTCAATTGCCATGTAATTGTATTAGGAAGATAAGGTTGATTACAAAGCTTCAATGTTCTGTAGCTGGTAAGACATATAGTTCTAGGACCGGTGATGATTCACGGGAGTCTAAACGGGACTCTGGCGAAATTCAAAGAAAACGGGCAGGGGCATCGTCGGTGTATGTTGGTTATGCTCATCCGAGTTTATCTGAAATGAAGAAAGAAAAGGCGAGGTTGCGGGAAAATGTTTACGAGTTCTTGCGAAGAATTGGCATTGTTCCTGATGAGCTTGATGGTCTTGAACTTCCTGTTACGGTTGGTGTTATGAAGGAGCGGGTTGATTTTCTTCATAGTTTGGGGCTTACGATTGAGGATATTAACAACTATCCTCTTGTACTGGGATGCAGTGTCAAGAAGAATATGATTCCTGTGCTTGATTACCTTGGTAAATTGGGAGTTAGGAAATCCACATTAACGCAGTTTTTGCAGAGATACCCACAAGTGCTTCATGCTAGTGTGGTTGTGGATCTTGTGCCGGTCGTTAAGTATCTTCAAGGAATGGGTATCAAGTCGAACGGTATTCCTCGTGTTCTTGAGAGGTATCCTGAAGTGCTGGGATTCAAACTTGAGGGAACCATGAGCACATCAGTTGCTTATTTGATTGGAATTGGTGTTGGAAGAAGAGAACTCGGAGGTATCTTAACTAGATTTCCAGATATTTTGGGGATGCGGGTTGGTAGAATCATCAAGCCTTTTTTGGAGTATTTGGAAAGCTTGGGTATTCCAAGGCTAGCCATTGCCAGACTGATAGAGACACATCCTTATATTCTTGGATTTGATCTGGATGAGAAGGTGAAGCCAAACATCAAATCCCTCGAAGAGTTTAATGTTCGGCAAACATCACTTGCCTCTATAATCGCTCAGTATCCTGACATCATTGGAGCTGACCTAGAGCCGAAGCTTGCCAATAAGAGAAGCGTGCTCAACTCTGTGCTTGATTTGGATCCAGAGGATTTCGGCCTAATCGTTGAGAAGATGCCACAGGTAGTTAGCCTCAGTACTACACCTATGCTGAAGCACGTTGATTTTCTTAAGGATTGTGGGTTTTCTGTGGATCAAATGAGGAAGATGATTGTTGGATGCCCTCAACTACTTGCTTTAAACATTGATATCATGAAACTTAGCTTCGAGTACTTCCAAAGTGAGATGGAAAGGCCTTTGGAAGACTTGGTTGAATTCCCAGCATTCTTCACTTATGGTTTGGAGTCAACTGTAAAACCCAGGCATAAAATGGTTGCTAAGAAAGGATTGAAGTGTTCTCTGGCATGGATGCTTAATTGTTCTAATGAGAAATTTGAGCAACGAATGGACTACGACACTATTGATATGGAAGAGATGGAAATGGAACCATCATTTGACATGAATTCGTTGATGCGACCAAGGAGCGATGAATCAGATTCTGATTATGAAGACAGTGATTATGATGATGATGATGATGAGTAG 1590 0.4138 MNFSGTLTKPIFPFSQTEMPILTFGHSKLSAATIALQLPCNCIRKIRLITKLQCSVAGKTYSSRTGDDSRESKRDSGEIQRKRAGASSVYVGYAHPSLSEMKKEKARLRENVYEFLRRIGIVPDELDGLELPVTVGVMKERVDFLHSLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTLTQFLQRYPQVLHASVVVDLVPVVKYLQGMGIKSNGIPRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRRELGGILTRFPDILGMRVGRIIKPFLEYLESLGIPRLAIARLIETHPYILGFDLDEKVKPNIKSLEEFNVRQTSLASIIAQYPDIIGADLEPKLANKRSVLNSVLDLDPEDFGLIVEKMPQVVSLSTTPMLKHVDFLKDCGFSVDQMRKMIVGCPQLLALNIDIMKLSFEYFQSEMERPLEDLVEFPAFFTYGLESTVKPRHKMVAKKGLKCSLAWMLNCSNEKFEQRMDYDTIDMEEMEMEPSFDMNSLMRPRSDESDSDYEDSDYDDDDDE* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2087 529 Gene3D Transcription termination factor 3, mitochondrial 154 278 IPR038538 -
Mal8g2087 529 Gene3D Transcription termination factor 3, mitochondrial 279 491 IPR038538 -
Mal8g2087 529 MobiDBLite consensus disorder prediction 64 81 - -
Mal8g2087 529 MobiDBLite consensus disorder prediction 498 529 - -
Mal8g2087 529 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 34 515 - -
Mal8g2087 529 Coils Coil 98 118 - -
Mal8g2087 529 PANTHER CGI-12 PROTEIN-RELATED 34 515 IPR003690 GO:0003690|GO:0006355
Mal8g2087 529 SMART mt_12 404 435 IPR003690 GO:0003690|GO:0006355
Mal8g2087 529 SMART mt_12 332 364 IPR003690 GO:0003690|GO:0006355
Mal8g2087 529 SMART mt_12 369 399 IPR003690 GO:0003690|GO:0006355
Mal8g2087 529 SMART mt_12 152 183 IPR003690 GO:0003690|GO:0006355
Mal8g2087 529 SMART mt_12 296 327 IPR003690 GO:0003690|GO:0006355
Mal8g2087 529 SMART mt_12 436 467 IPR003690 GO:0003690|GO:0006355
Mal8g2087 529 SMART mt_12 260 291 IPR003690 GO:0003690|GO:0006355
Mal8g2087 529 SMART mt_12 188 219 IPR003690 GO:0003690|GO:0006355
Mal8g2087 529 SMART mt_12 224 255 IPR003690 GO:0003690|GO:0006355
Mal8g2087 529 MobiDBLite consensus disorder prediction 60 83 - -
Mal8g2087 529 Pfam mTERF 174 482 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2087 Mal-Chr8 43493220 43494809 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal8g2087 mTERF 8.2e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2087 K15032 - gmx:100785223 784.252