Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2085 ATGGGCGCCGTGGCTGAGTGTTTACCGCCGCCGCAACAAGAGGAGGAGCTGGCGGTTCTGTCACTAAACAAACTGCCGTTAGGGTTCCGGTTCCGGCCTACTGATGAGGAGATTATTGATTATTATCTAAGGATGAAGATTAATGGAAACGGTGATGAAGTTTGGGTTATTCGTGAAGTTGATGTCTGTAAATGGGAGCCTTGGGATTTGCCTGACTTATCGATCGTAAGGAACAAGGATCCGGAGTGGTTTTTCTTCTGTCCGCAGGATCGGAAGTATCCGAATGGGAGCAGGCTGAACCGTGCAACAACTAATGGGTATTGGAAGGCGACGGGAAAGGATAGGAAGATCAAGTCTGGCTCTACTTTAATTGGAATGAAGAAGACTCTTGTTTTCTACGCTGGTCGTGCTCCGAAGGGGCAGAGGACTCACTGGGTTATGCATGAGTACCGGCCTACCTTAAAGGAGCTTGACGGTACCAATCCTGGACAGAACCCATATGTCATTTGTCGCTTGTTTAAGAAGCAAGATGAGAGTCTTGAAAGTTCAAACTGTGGTGAAGTGGAGCAGCAGACTACTTCAACTCCTACGACTGCCAATTACTCTCCAGAAGAAATACAGTCTGATCTAAATCTGGTTCCTGTATCTTCCTCACCAGTCACAGAAGATGATAGGTCCCTAGCAGCTATCCCTGAGAACTCTGAGGAAGCAGTATCCCACGTTATAACCCCAGCTGATTGCTATAGCGATGCATTTAATGCTTCTGATGTGCAACATCAAAGTGTAGAAGTACCTGCTGCAGAGGAGGATCAGCTGTTGAACTTGGACATATTTGATAGCCCACAATTTCTGCCATGGGATGATAAATTATTCTCCCCAGTCCACGCACATTTTCCACCAGAATTTTATGGTCAAGCCAACAATGAATTATCTCAGTATGGTACAAATGAGATAGATGTTTCAGACTTTTTCAGCTCGGCTGTTAATTGGGACAACTTCTCTAGTGAGGCGAACTCATGCTTATTTAATATTCCGGAGAATGGGTCGTGCAGTGACTCGGATGTGGAAATGACCAATATGATGCATCTGCAAGCATCACATGCTTATCTCGAGGGAGTAACTCAGCAAAATAGTGATGTAGGGTTGTTTCAGAACAATTCCCAGATGACTTTTTCTAATGATTTTAGTATGGTCCAAACACCCACTGTGGTCAATGAATATGAGCAATTGGGGAATTTGGAAACTGTTGTCGATGGCGACACTGGAATCGGGATAAGGTCTCGACAAGGACAAAATGAACAACCAGACATGAACCTAGTGATGCAAGCACAAGGTAGTGCACCAAGGAGAATACTATTGGGAGGATTTGTTACGCATTCCCTTGTTTCCGGGATGACGGAAGATGGGAGTTGTGCACCAGAACATGAGCAATCAAGGAATTTGGATACTATTGTCCATGGTGACACTGGTATAAGGATAAGGGCTCGACAACGAAGAAATGAAGAGTCAAACATGAACCCAGTGATGCAAGCGCAAGGCCCAGTGATGCAAGTGCAAGGTAGTGCACCGCGTAGAATACGATTGGGAGGATTTGTTACGAACTCCTATGTTTCCGAGGAGACAACAAAAGACGAGAGTTTGCAGGAGACAAAAGCTTCAGAAAACCATGCTGCTGCTGAGAGTGCCACTGACCCAGAGAAGACATCTCCCATGTCAGCAAGAGAGATCTGTCAGCAACATTTTACAACTGCAGAATCCAACTTAGAGTCGAAAAACTTTCCATTGGGCAGGGTCCGTTACACTTCAAAGACATCCTCGACTATTGCTAGGTGGTCTACTGTTCTTGCATTTTCTGCCATTGTACTGGTCTCACTAGTATTTATTGTTAATATTTGGGGATATCTTAGATTTAGAAATGCTTATTAG 1926 0.4476 MGAVAECLPPPQQEEELAVLSLNKLPLGFRFRPTDEEIIDYYLRMKINGNGDEVWVIREVDVCKWEPWDLPDLSIVRNKDPEWFFFCPQDRKYPNGSRLNRATTNGYWKATGKDRKIKSGSTLIGMKKTLVFYAGRAPKGQRTHWVMHEYRPTLKELDGTNPGQNPYVICRLFKKQDESLESSNCGEVEQQTTSTPTTANYSPEEIQSDLNLVPVSSSPVTEDDRSLAAIPENSEEAVSHVITPADCYSDAFNASDVQHQSVEVPAAEEDQLLNLDIFDSPQFLPWDDKLFSPVHAHFPPEFYGQANNELSQYGTNEIDVSDFFSSAVNWDNFSSEANSCLFNIPENGSCSDSDVEMTNMMHLQASHAYLEGVTQQNSDVGLFQNNSQMTFSNDFSMVQTPTVVNEYEQLGNLETVVDGDTGIGIRSRQGQNEQPDMNLVMQAQGSAPRRILLGGFVTHSLVSGMTEDGSCAPEHEQSRNLDTIVHGDTGIRIRARQRRNEESNMNPVMQAQGPVMQVQGSAPRRIRLGGFVTNSYVSEETTKDESLQETKASENHAAAESATDPEKTSPMSAREICQQHFTTAESNLESKNFPLGRVRYTSKTSSTIARWSTVLAFSAIVLVSLVFIVNIWGYLRFRNAY* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2085 641 Gene3D NAC domain 34 179 IPR036093 GO:0003677|GO:0006355
Mal8g2085 641 MobiDBLite consensus disorder prediction 181 202 - -
Mal8g2085 641 ProSiteProfiles NAC domain profile. 25 175 IPR003441 GO:0003677|GO:0006355
Mal8g2085 641 Pfam No apical meristem (NAM) protein 26 151 IPR003441 GO:0003677|GO:0006355
Mal8g2085 641 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 20 436 - -
Mal8g2085 641 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 20 436 - -
Mal8g2085 641 SUPERFAMILY NAC domain 20 175 IPR036093 GO:0003677|GO:0006355
Mal8g2085 641 MobiDBLite consensus disorder prediction 539 571 - -
Mal8g2085 641 MobiDBLite consensus disorder prediction 183 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2085 Mal-Chr8 43472178 43476840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2085 17 453 NAC Transcription Factor Family AT4G35580 40.570 2.67e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal8g2085 NAM 2.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2085 - - mtr:MTR_5g069030 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2085 8 43472178 43476840 Mal2g1675 2 20075722 20077035 PCT