Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2076 ATGGGAGAGGGAGAGAGAATGGTGGAACCACAAGAACCAGAACCAGAAACATCATCATCAACAACAACAACAACAACGTTATCAACAACATGGAAACAAAACCAAACAATTCAAACATTATCAGAAAAACTAACAAACGGAAACCTTAACTCCAAAATCGAAGCTGCAAGAGAAATTCGAAGAATGGTTCGAAAATCATCAAAGACACGCTCCAAACTCGCTGATGCTGGTGTTATTCAACCACTCATCTTCATGCTTTCTTCTTCAAATCTGGATGCCCGTCAATCCTCTCTTCTTGCTCTTCTCAACCTTGCTGTTCGGAATGAACGAAACAAGGTCCAAATAGTGACAGCTGGTGCAGTGCCTCCTCTGGTGGAGCTCCTCAAGATGCAAACTAACGGTATACGAGAATTGGCTACAGCCGCAATCTTGACACTCTCATCTGCTGCATCCAACAAGCCGATTATTGCTGCTTCAGGAGCTGCTCCTCTCCTTGTTCAGATTCTCAAATCTGGAAGTGTTCAAGGCAAAGTTGATGCTGTTACAACCCTCCATAATCTCTCCCCCAGCACCGAGAATCCCATTGAACTTCTTGATGCTAGCGCTGTTTCCCCTCTTATCAATCTTCTTAAAGATTGTAAGAAGTATTCAAATTTTGCAGAAAAAGCTACATCACTACTTGAAATCCTTTCCAACTCTGAAGAGGGACGAATCGCAATCTCACTTACAGAAGGTGGAATTTTAACCCTAGTAGAGACAGTTGAAGACGGATCACTTGTCAGCACAGAACATGCTGTTGGAGCATTGCTATCGTTATGTCTAAGCTGCCGGGATAAGTATCGGGAACTAATTCTTAAAGAAGGAGCAATTCCAGGTCTGTTACGGCTGACAGTAGAGGGCACAGTCGAAGCTCAAGATAGAGCTCGCACGCTTCTGGACTTGCTCAGAGATTCTCCTCAAGAAAAAAGACTTGACTCCTCGGTTTTGGAGAAAATTGTTTACGACATGGCTGAACGGCTAGATAGAGTATCGGTAGATAAAGCTGCTGAAACTTCCAAATGA 1062 0.4341 MGEGERMVEPQEPEPETSSSTTTTTTLSTTWKQNQTIQTLSEKLTNGNLNSKIEAAREIRRMVRKSSKTRSKLADAGVIQPLIFMLSSSNLDARQSSLLALLNLAVRNERNKVQIVTAGAVPPLVELLKMQTNGIRELATAAILTLSSAASNKPIIAASGAAPLLVQILKSGSVQGKVDAVTTLHNLSPSTENPIELLDASAVSPLINLLKDCKKYSNFAEKATSLLEILSNSEEGRIAISLTEGGILTLVETVEDGSLVSTEHAVGALLSLCLSCRDKYRELILKEGAIPGLLRLTVEGTVEAQDRARTLLDLLRDSPQEKRLDSSVLEKIVYDMAERLDRVSVDKAAETSK* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2076 353 Gene3D - 159 324 IPR011989 -
Mal8g2076 353 Pfam Armadillo/beta-catenin-like repeat 108 147 IPR000225 GO:0005515
Mal8g2076 353 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 19 342 - -
Mal8g2076 353 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 77 119 IPR000225 GO:0005515
Mal8g2076 353 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 119 161 IPR000225 GO:0005515
Mal8g2076 353 MobiDBLite consensus disorder prediction 13 29 - -
Mal8g2076 353 Gene3D - 35 158 IPR011989 -
Mal8g2076 353 SMART arm_5 66 106 IPR000225 GO:0005515
Mal8g2076 353 SMART arm_5 107 148 IPR000225 GO:0005515
Mal8g2076 353 SMART arm_5 233 274 IPR000225 GO:0005515
Mal8g2076 353 SMART arm_5 190 232 IPR000225 GO:0005515
Mal8g2076 353 SMART arm_5 149 189 IPR000225 GO:0005515
Mal8g2076 353 SUPERFAMILY ARM repeat 32 321 IPR016024 -
Mal8g2076 353 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 201 245 IPR000225 GO:0005515
Mal8g2076 353 PANTHER U BOX DOMAIN-CONTAINING 19 342 - -
Mal8g2076 353 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2076 Mal-Chr8 43320995 43327041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2076 28 317 U-box Gene Family AT3G54790 38.699 1.60e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2076 K08332 - gmx:100782472 483.411