Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2070 ATGGAGTCTGCTGGATCCGTGATACCTGTTGTTGTACTGCAGTTTACTAAGCTTAAAATATTTAGAGAAAATGTTTCCCTTCAAAATATAATGGGCACCACTAGGATAATGTTGAATCCAGATATTCTAGAGGTTGTTAATTTCAAGAATGGATTGGCTGTTCATGGAGTTGAGTCCAATCACTCAGTTGCTGTCATTAGAGCTAGATCACAATTTTCTAAAAAGGATGACTTCCTTAACTTATTTCCCAAGCAAACTATAGGTGGTATTAAGAATTCTGTGGAAGATGGAATTTTTGTTGTTTATGGAAGTGTAACTGGTTTGGTTGAAGGAGAAGACTTTTGGTATCCTGCGTGCAAGTGCCATAAGAGTGTTACCCCTTACTTTGGTTCTTACTATTGCAGTGGTTGTGTTAAGCATGTTTTTCATATTATTCCTATGTATAGATTGAAGATGTATGTTTGTGATGGCATTGATGATGTTGTGTTTGTTATGTTTGATTCTGATCTGCAACAACTTCTTGGAAAAACATGTGCACAAGTTGTATCTGAGTCTAAGGTATCTGTTGGTGATGGAGTTCACCCATCTGTGTTTGATGTTCTAATTGGGAATGAGCTTCTTTTTAAGGTTGAAAAGAAGTTTGTGTCCATATCTCTTTTTGACAGTTCCTTTAGAGTGAAAAGAGAATGTGATGATTCGACTATCATATCATCGTTTATGTCTGTTGTGGTTGAGGGAAATTCTAATGTTTTGGTATGTTGTGTTGCTATGGTTCTGCTAAGAGTTGTTGTTCATTAA 798 0.3609 MESAGSVIPVVVLQFTKLKIFRENVSLQNIMGTTRIMLNPDILEVVNFKNGLAVHGVESNHSVAVIRARSQFSKKDDFLNLFPKQTIGGIKNSVEDGIFVVYGSVTGLVEGEDFWYPACKCHKSVTPYFGSYYCSGCVKHVFHIIPMYRLKMYVCDGIDDVVFVMFDSDLQQLLGKTCAQVVSESKVSVGDGVHPSVFDVLIGNELLFKVEKKFVSISLFDSSFRVKRECDDSTIISSFMSVVVEGNSNVLVCCVAMVLLRVVVH* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2070 265 Gene3D - 2 61 IPR012340 -
Mal8g2070 265 PANTHER REPLICATION FACTOR A 1, RFA1 10 182 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal8g2070 265 CDD RPA1_DBD_C 99 210 IPR013955 -
Mal8g2070 265 Pfam Replication factor-A C terminal domain 102 209 IPR013955 -
Mal8g2070 265 Gene3D - 80 232 IPR012340 -
Mal8g2070 265 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 10 182 - -
Mal8g2070 265 SUPERFAMILY Nucleic acid-binding proteins 94 213 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2070 Mal-Chr8 43082157 43083955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2070 9 178 Core DNA Replication Machinery Family AT5G08020 23.333 1.93e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2070 - - mtr:MTR_8g062030 234.958