Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2069 ATGGGTTCTTTATGCGATTTTTGCGGAGACCAGAGGTCTTTGGTGTACTGCCGCTCTGATGCTGCTTCCTTATGTTTGTCGTGTGATCGAAATGTTCATTCTGCTAATGAACTTTCTAAGCGTCATTCAAGAACAGTTGTATGTGAGAGGTGTAATTTACAACCGGCATATGTGAGGTGTGTTGAAGAGAAAGTTTCACTTTGTCAGAGCTGTGATTGGTCAGCTCATGGTACTGATCCATCTTCTTCAACACACAAGAGACAATCAATCAATTGCTTCTCTGGCTGTCCTTCAGCTTCCGAGCTTTCTTCAATATGGCCCTTTTTCTCAGACATCCCTTCTACGGGTGAAGCATGTGAACAGAAACTCGGTTTGATGAGAATTAATGAGAACAGTGACAACAGTACTAGGGTTCCTCCAGAAAGCAAGAATGTGTCTGGTTCAGCTCAAGTGGCCAATCTTCCAAGCAAAAACAAATCTGGGGTCGACACATCTTCAATACCTGAGTCAAGTGCCGAACCCGGTATTTTGGACCAGGCACCCGGATCTTCCAATGAATCTATGCGCAAGTTACTATGTCCCAGTAGAAAGATTCCTGCACTATGTGAAGATGATAATTTGCTTGATGATTTCAACATAGATGAGATGGATTTTGAACTTGAGAACTATAAGGAACTTTTTTCTTTTGCTCTCAATCACTCTGAAGATTATTTTGAAAATGGTGGTATTGATAGCTTATTTGAGAGAAAAGACATATCTGCTAGTGCTGGTGATTCAAATTGTCAAGGTGCTGTTGCTGCTGAGGGGTCATCAGCTAGGTTTGTTAGTGCTATCCAACCAGCATGCAGTAATGCAGCATCTGCAGATTCAATATTAAGTACTAAAACTGAACCGGTTATTTATTTTACGGAAAGGCAATCCCAATCAAACCTTTCATTTTCTGGCGTTAACAAAGATGCTAGTGCTTGTGACTATCAAGAGTGTGGTGCTTCTTCAATGCTTCTCACAGGGGAGCCTCCCTGGTGTCCTCCTTGCCCCAACAATTCTATTCAATCTGCTAATCGCAGCAATGCAGTCATGCGTTATAAGGAAAAGAAAAAGAATCGAAAGTTTGATAAGAAAGTAAGATATGCTTCTCGGAAGGCCAGGGCTGATGTCAGAAAACGTGTGAAAGGCCGGTTCGTCAAAGCTGGGGAAACATACGACTATGACCCTTTGAGTCAAACAAGAAGCTGCTGA 1239 0.4221 MGSLCDFCGDQRSLVYCRSDAASLCLSCDRNVHSANELSKRHSRTVVCERCNLQPAYVRCVEEKVSLCQSCDWSAHGTDPSSSTHKRQSINCFSGCPSASELSSIWPFFSDIPSTGEACEQKLGLMRINENSDNSTRVPPESKNVSGSAQVANLPSKNKSGVDTSSIPESSAEPGILDQAPGSSNESMRKLLCPSRKIPALCEDDNLLDDFNIDEMDFELENYKELFSFALNHSEDYFENGGIDSLFERKDISASAGDSNCQGAVAAEGSSARFVSAIQPACSNAASADSILSTKTEPVIYFTERQSQSNLSFSGVNKDASACDYQECGASSMLLTGEPPWCPPCPNNSIQSANRSNAVMRYKEKKKNRKFDKKVRYASRKARADVRKRVKGRFVKAGETYDYDPLSQTRSC* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2069 412 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 1 411 - -
Mal8g2069 412 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mal8g2069 412 MobiDBLite consensus disorder prediction 131 187 - -
Mal8g2069 412 CDD Bbox1_BBX-like 47 90 - -
Mal8g2069 412 CDD Bbox1_BBX-like 4 44 - -
Mal8g2069 412 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Mal8g2069 412 ProSiteProfiles CCT domain profile. 355 397 IPR010402 GO:0005515
Mal8g2069 412 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 411 - -
Mal8g2069 412 Pfam CCT motif 355 397 IPR010402 GO:0005515
Mal8g2069 412 SMART bboxneu5 48 90 IPR000315 GO:0008270
Mal8g2069 412 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2069 Mal-Chr8 43049339 43052950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2069 1 411 C2C2-CO-like Transcription Factor Family AT3G07650 52.830 9.19e-139 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mal8g2069 CCT 5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2069 - - gmx:100783016 642.114