Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2047 ATGGTCTTACCACGTTCAAGGCGAAGACGTGGCATCCTTCCACAAGCTCCGTTCTTGATCGGTATCATCTCAGCCGTTGATCTCCTTGCCGATCCAAGAACCACCCGACAAGATTCTACTAACGGCGTTGGAATCTCGAATCTTCCCCAATCAAAGATTCGAGGATCCAATGGCGTTTCAGAAACTCGAATCTTCCCCAATCAAAGATTCGAGGATCCAATGGCGTTTCAGAAACTCTCCGTCACCAACATTCAAGGCCGAGTCTACTGTGGGAAACTCAAGAGACACAGGTTTACCACTGGCTGGAATCCAACCATGAACAACAAGAAAATCGTTACTGGTGATTCTGTTGCTTTCATGTATAATTCAGCCGGAAATAGATTTGTCGGAATACGCCGGAACATGAAGTTTGAGGATGAGTTGGAGGTTGAGGGTTTTTCGACGAGCAGAAAAAGGGTGAACGGAGAATGCGGTTATGGAGGCAGTGGAATTGGCACAGGAGAAGAACAGAAGATAGCGTTTGAAGGGATGCAATGA 537 0.4674 MVLPRSRRRRGILPQAPFLIGIISAVDLLADPRTTRQDSTNGVGISNLPQSKIRGSNGVSETRIFPNQRFEDPMAFQKLSVTNIQGRVYCGKLKRHRFTTGWNPTMNNKKIVTGDSVAFMYNSAGNRFVGIRRNMKFEDELEVEGFSTSRKRVNGECGYGGSGIGTGEEQKIAFEGMQ* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2047 178 SUPERFAMILY DNA-binding pseudobarrel domain 66 137 IPR015300 -
Mal8g2047 178 MobiDBLite consensus disorder prediction 36 58 - -
Mal8g2047 178 Gene3D - 59 135 IPR015300 -
Mal8g2047 178 PANTHER AUXIN RESPONSE FACTOR 63 149 - -
Mal8g2047 178 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 63 149 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2047 Mal-Chr8 42375701 42376621 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2047 64 133 B3 DNA Binding Superfamily AT1G77850 43.421 1.30e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2047 - K14486 cam:101503141 82.8037