Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2020 ATGGCAAGAGGAGGAAATCATGGGGTCAATGGCATTAAAATCTTTGTCAATGAAAATATAAATGTCAATTACCCTTTGATGAATAGGTTCTTTTGGGGCCAAATGATTCACTACCCTAACTATCAACAAAACAATGCAAGTGTTTTCCCCTACTCTTATGGTTCAAGCCATGAGTTTATGTGGCCAAATACTCAAGAATCAAGCTTTGTTGTTGATGGGGTCTTAGCAAATGAAGAGGCTTTGAAGTGGACTAACTTCAACCAAACTCCCACATTGTGCCTTAAGGATATTCAAGGTTATGGTGAAAACACCAAAATTGTGGGAAGGAAAACTAAGAAAGAGACTTCTGAGGTCTTGATCAAAGGACAGTGGGCAGATGAAGAAGACAGGAAGCTAATAAAGTTGGTGAAGCAATATGGTGAAAGAAAATGGTCTCAAATATCAGAGAAGCTGGAAGGAAGGGTTGGCAAGCAGTGTAGAGAGCGATGGCATAATCATTTGCGTCCTGATATTAAGAAAGATAGCTGGAGTGAAGAAGAAGAGAAGATATTAGTAGCTACACATGCAAAAATTGGAAATCGTTGGGCTGAGATAGCAAAGAGAATTCCAGGAAGAACAGAAAATGCCATAAAAAACCATTGGAATGCCACTAAAAGGAGACAAAATTCAAGGAGAAAGAATAAGAAAAATGAAAATAATTCTAAGGGTGCAAAACCAAAATCCTCTATTCTTGAAGACTATATCAAAACCAACAATTCCAACACTACCAAAATTACCAACATACCCTCTTCGTCTCATACAACACTCTCCCAAAACATTGGAACAAATGATGAGCTTGTTAATTTAATCGGGTACCCGAATTACAACATGCACTTGGATGAGACTAGTCTTACTACCCCTATAGATAATTTTCTTCCTTATGATCTTTACCTCTCTCAATTGTTGAACTTAGCTTGA 957 0.3762 MARGGNHGVNGIKIFVNENINVNYPLMNRFFWGQMIHYPNYQQNNASVFPYSYGSSHEFMWPNTQESSFVVDGVLANEEALKWTNFNQTPTLCLKDIQGYGENTKIVGRKTKKETSEVLIKGQWADEEDRKLIKLVKQYGERKWSQISEKLEGRVGKQCRERWHNHLRPDIKKDSWSEEEEKILVATHAKIGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSRRKNKKNENNSKGAKPKSSILEDYIKTNNSNTTKITNIPSSSHTTLSQNIGTNDELVNLIGYPNYNMHLDETSLTTPIDNFLPYDLYLSQLLNLA* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2020 318 ProSiteProfiles Myb-like domain profile. 168 218 IPR001005 -
Mal8g2020 318 Pfam Myb-like DNA-binding domain 124 182 - -
Mal8g2020 318 Gene3D - 120 172 - -
Mal8g2020 318 CDD SANT 124 167 IPR001005 -
Mal8g2020 318 PANTHER MYB PROTEIN-RELATED 3 279 - -
Mal8g2020 318 SMART sant 172 220 IPR001005 -
Mal8g2020 318 SMART sant 120 169 IPR001005 -
Mal8g2020 318 MobiDBLite consensus disorder prediction 206 244 - -
Mal8g2020 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 116 171 IPR017930 -
Mal8g2020 318 ProSiteProfiles Myb-like domain profile. 116 167 IPR001005 -
Mal8g2020 318 SUPERFAMILY Homeodomain-like 120 214 IPR009057 -
Mal8g2020 318 CDD SANT 175 218 IPR001005 -
Mal8g2020 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 172 222 IPR017930 -
Mal8g2020 318 PANTHER MYB TRANSCRIPTION FACTOR 3 279 - -
Mal8g2020 318 Gene3D - 174 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2020 Mal-Chr8 41955943 41958434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2020 111 316 MYB Transcription Factor Family AT5G58850 47.970 5.08e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal8g2020 Myb_DNA-bind_6 1.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2020 K09422 - aprc:113874412 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2020 8 41955943 41958434 Mal8g2020 8 41955943 41958434 ECH