Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g2003 ATGAGCTTCTTTTCAGATTCTACATCACGACCATTTCGTACCATGAATGAAGATTTGGAGAACAATGTAGAGACACCACAAAACATTTCATCAAGTTCCATTGTGAGAAAGAAATCAGATATTGTTTTGGTGACAAATAATGTTCGGTTCCAAATACTTAGAAGTGTGATGAGAAATATGAAAGAGGTGATGTTGGGTACTAAGCTTGTTGTGCTTTTTCCGGCTGTTCCTTTAGCTGTTGCTGCTGATTTTTGTAGCCTTGGAAGGCCTTGGATTTTTGCTTTGAGTCTACTTGGACTTGCTCCCTTAGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCATATTTCACCGGCCCAACAGTTGGAGGGCTTCTAAATGCAACTTGTGGTAATGCAACCGAGATGATAATAGCAATATTAGCACTTCATCAGAACAAAATACATGTTGTCAAGTTCTCACTGCTTGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTAGGCAGCTCACTCCTTTGTGGTGGCTTAGCAAACCTTAAGAGGGAGCAAAGATATGACAGGAAACAAGCGGATGTAAATTCATTGCTCTTGTTGCTGGGATTGCTATGCCATTTGCTGCCATTAATGTTCAAATATGCATTGGCTGGGGGAAATCATTCTATTGCCAATTGTACTCTTCAATTGTCAAGAGCAAGCAGTGTTGTTATGCTTCTAGCATATGTTGCATATATCTTCTTCCAATTGAAAACTCATCGAAAAATATTTGATGCACAAGAGGTGGAAGATGAAGATGATGAAAAAGCAGTGATAGGATTTTGGAGTGCATTTAGTTGGTTGGTGGGTATGACATTGGTCATATCTGTTCTTTCTGAATATGTTGTGGGAACCATTGAGGCTGCTTCAGATTCTTGGGGCATTTCTGTTAGCTTCATTAGCATAATTTTGCTACCAATTGTGGGGAATGCTGCAGAACATGCTGGTTCAATTATATTTGCTTACAAGAACAAGTTGGACATATCTTTAGGTGTTGCTATGGGATCTGCTACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGTATACGAATGGATTTGGACTTCAATCTACTTGAAACTGGATGTCTTGGTTTTGCAATTATTGTTACAGCCTTCACTTTACAGGATGGAACTTCACACTATTTGAAAGGAGTGGTTCTTACTCTATGTTACATTGTCATTTCTGCATGTTTTTTTGTTCTCAAAACTCCACAGATCAACCATTATGGTATCGCCATGCTTTGA 1302 0.3909 MSFFSDSTSRPFRTMNEDLENNVETPQNISSSSIVRKKSDIVLVTNNVRFQILRSVMRNMKEVMLGTKLVVLFPAVPLAVAADFCSLGRPWIFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIAILALHQNKIHVVKFSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLMFKYALAGGNHSIANCTLQLSRASSVVMLLAYVAYIFFQLKTHRKIFDAQEVEDEDDEKAVIGFWSAFSWLVGMTLVISVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIRMDLDFNLLETGCLGFAIIVTAFTLQDGTSHYLKGVVLTLCYIVISACFFVLKTPQINHYGIAML* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g2003 433 Pfam Sodium/calcium exchanger protein 275 415 IPR004837 GO:0016021|GO:0055085
Mal8g2003 433 Pfam Sodium/calcium exchanger protein 91 248 IPR004837 GO:0016021|GO:0055085
Mal8g2003 433 MobiDBLite consensus disorder prediction 1 25 - -
Mal8g2003 433 Gene3D - 266 418 IPR044880 -
Mal8g2003 433 Gene3D - 120 263 IPR044880 -
Mal8g2003 433 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 20 427 IPR004713 GO:0006812|GO:0008324|GO:0016021
Mal8g2003 433 TIGRFAM cax: calcium/proton exchanger 74 418 IPR004798 GO:0006816|GO:0015369
Mal8g2003 433 PANTHER VACUOLAR CATION/PROTON EXCHANGER 20 427 - -
Mal8g2003 433 TIGRFAM caca2: calcium/proton exchanger 55 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g2003 Mal-Chr8 41701814 41707480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g2003 24 424 Antiporters AT2G38170 67.971 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g2003 K07300 - gmx:100816844 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2003 8 41701814 41707480 Mal8g2003 8 41701814 41707480 ECH