Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1985 ATGATGTCCATGATCATTCAAATTCAAAGGTGGTTGATGCAGCCAAAGGTGTGGAGATTCGTGGGCTTTGCTTCAGCTGTTGTTGGGCTGCTCTGTTATGCTCTAAGCTCTTCCTTCAACTATCTCTTTGGAAAATGGAATTTGTTGAAAATATTTCTTTATATTGTTTTCAGTTTCATCATCTGCTTGATGATTTTATTTGCTAAGATATTGCAATATTCTAGAAGTTTCAAATTCAAAGCTCATACAGCATTTTTTGTATTGACAATCACCTCAGTCTATTCCTTTTTCTTTGATAAAGTGGTGAATGGAAAACCAGATGCATATAGCATCATTTCATGTGTTGCCTTTGCTATCATGTCACTTAGTTTGTCGAGGCAAACTGAGTGCGGATTTGAAGTCGATCTTCTTTACTTTTTTCTTGGATGTTTAATTGTGCAACTCATGAAGATTAAATTGCAACTATTCATTCTTGGAGCTGGTTTCAGCTATTCTCTTATTACTCTTCGTTCTTCCTTTTCTTCGGTAGATGCCATAGGAGATAATCAGTACCTTAACCTCGAAGATGGAAATTCAGTGGTTCTTTATATGGATTCTCTACAACTGGCCAGTACTAATATTGCAACTGCTACAAATAGCAGCAATAGCATCGATTCGCAACAATTGGTGATCAGTACTGATATTGGTAGTATGATTGAAAAGCTCGGGACTTATGTGAAGGCGCTTCAGCACCAAAATTCAAATCTCATTCAAATGTTGTTGGAGCATGTAAGAAAATATGTTGATGAACACTCTCAATTGGTGGTGACGGACTCTAACTTCATGATGGATGCGCTGAAGCCAGAAACCATCAAAGGCCTCGAGGAAACAGCGAAGGTTATGTTGAGCGATGGGTTTGAGAAGGATTTTTCGGATGTGTACAATAATTGTCGTAGGGAATGCTTAAAAGATTGCCTAAAGCATAGATTATTCGGGTTGCAGAAGCTCAACATGGAGGACATTCACAATATGCCATGGAAGGATCTCGAAGACCAGATTGAAAGGTGGATTAAAGCTTTCAACGTCGCTGTCAAGATACTTTTCCCTGGCGAGCGACGACTTTGCGATCGCATCTTCTTCGGATTCTCACTAGCTGCTGATATCTCCTTCATGGAAATTTGTAGGGGATCCGTTGTCCAACTTCTAAATTTTGCCAACTCAGTTGCCATGGGAAGCCGTTCCCCGGAGCGTTTGGTTAAAATGCTCGAGGTGTTTGAAACATTGTGTGACTTAATTCCAGAATTTGAGTCCTTATTTTGTGATCAGTACAGTGAGTCTCTAAGGAATGAAGCAATTACGATATGGAAGAGATTGAGGGGAGCAATCAGAGGAATTTTCATGGAGTTGGAGGATCTGATCGACGATTCCCCACTCTATGGGGCGATGCATAGCATTATGGACACATTGGAAAGCAATTTTAATGCAAAGTCGAAATTCTACGATGGCCCCTCTTTTGGCTATATTTTCTTGATGAATAAGGATACATACATAGTTCAAATGACTAAAGATAATGAACTAGGAACCCTTTTGGGGAATGATTGGATTCGGAAACACGCTCTGAAAGTTTGGAACTACAATGGAAAATATAAACAAACCATGGGCACTATCTCGCCCACTTTAGTGCAGGATTTATTCCGGTCGAAAAGGGGCCGTGGGGATGTTCAACAGTTATTGTACAACACCCAACAGATCGGTGCAATAGATGAGGTGAATGTGGAAGGTTCCAAAGAATCAAAGGGGTATGAAGGAGATGTGCAGGAAATAGAAGCACCACCCACGCAACCACCAGAAAGCAGCTGGGAAAAGGATCCAGAGATGAGAGCAATAGTGATCTCTCCCGCACCACGTTTTGGGAACGCAGAGAAAATGGCACCAGAAGACGGGTTTACATGGAGAAAATATGGCAAGAAAGAGATACTTGGCTTCAATTACCCTAGGAGTTACTATAGGTGCAGCCACATGAAATTACATGCGTGTCGAGCCAAGAAGCAAGTACAACAACTTGGTAAAAATCCCAACATATTTGAAGTAAGATACCATGGTGGACATTCCTGCAGCATGTCCTTAAAATTACCATCACGACAACCAGTGAATATCTCGAAGGATATGACTCAAACCACTATGCCTCCATCATCAACTTCATACTCTGAGTGGCTTTTATTGGGCACGCCAGCCAAATCCATAAACTCTATCCCAGAGGCCAAGCTAGCCGCTCCAGCCGACGGTGGTCATCATCCTATGATGGACAACGTCACGGGCTGTCTTGTTTCTGCTATAAGGTCACAGAAGGTGAGTGTTGTTAATTCAGCACAAACAGAGAGGACAATGGAGTTGTTAGAGAGCATATTGTCATCGAAGTCCGAAAAATATGTGGACCCCTCTTTGCGTCATTTTTTCATGATGAATAATTGGAGGTATTTAGAAATGGCAAATAGAAGAAGGGAAAATGGTATGGCAATTTTTGGTGATGCTTGGTTCCAAAAGAATAGAGTAAAAGTCCAACAAAAGCTTGAACTCTATCAAAAAAGCTCATGGGATAAGGTGTTGGAATTTTTAAATTTGGATATAAATGAGTCCATGGAACATAATATTGCAGTAGATTTAATGAAAGAAAAGCTCAATTTGTTCAACATGCACTTTACAGAAACATGCAGAGTTCAGTGCACATGGTCTATTCATGATTCTATGCTAAAGAAAGAAATTATTGAATCTCTCAAAAACACCTTGCTGCCAGCATATGGAATCTTCATCGGGAAGTTTCAGGATTTTCTTAAAAACAATGCTTACGAATATATCGAGTATGGAATGTTTGACATTCATGATGTACTTGATAATTTGTTTCTGGGAAACAAGACAGGCAGAGTTTGA 2907 0.4021 MMSMIIQIQRWLMQPKVWRFVGFASAVVGLLCYALSSSFNYLFGKWNLLKIFLYIVFSFIICLMILFAKILQYSRSFKFKAHTAFFVLTITSVYSFFFDKVVNGKPDAYSIISCVAFAIMSLSLSRQTECGFEVDLLYFFLGCLIVQLMKIKLQLFILGAGFSYSLITLRSSFSSVDAIGDNQYLNLEDGNSVVLYMDSLQLASTNIATATNSSNSIDSQQLVISTDIGSMIEKLGTYVKALQHQNSNLIQMLLEHVRKYVDEHSQLVVTDSNFMMDALKPETIKGLEETAKVMLSDGFEKDFSDVYNNCRRECLKDCLKHRLFGLQKLNMEDIHNMPWKDLEDQIERWIKAFNVAVKILFPGERRLCDRIFFGFSLAADISFMEICRGSVVQLLNFANSVAMGSRSPERLVKMLEVFETLCDLIPEFESLFCDQYSESLRNEAITIWKRLRGAIRGIFMELEDLIDDSPLYGAMHSIMDTLESNFNAKSKFYDGPSFGYIFLMNKDTYIVQMTKDNELGTLLGNDWIRKHALKVWNYNGKYKQTMGTISPTLVQDLFRSKRGRGDVQQLLYNTQQIGAIDEVNVEGSKESKGYEGDVQEIEAPPTQPPESSWEKDPEMRAIVISPAPRFGNAEKMAPEDGFTWRKYGKKEILGFNYPRSYYRCSHMKLHACRAKKQVQQLGKNPNIFEVRYHGGHSCSMSLKLPSRQPVNISKDMTQTTMPPSSTSYSEWLLLGTPAKSINSIPEAKLAAPADGGHHPMMDNVTGCLVSAIRSQKVSVVNSAQTERTMELLESILSSKSEKYVDPSLRHFFMMNNWRYLEMANRRRENGMAIFGDAWFQKNRVKVQQKLELYQKSSWDKVLEFLNLDINESMEHNIAVDLMKEKLNLFNMHFTETCRVQCTWSIHDSMLKKEIIESLKNTLLPAYGIFIGKFQDFLKNNAYEYIEYGMFDIHDVLDNLFLGNKTGRV* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1985 968 MobiDBLite consensus disorder prediction 588 617 - -
Mal8g1985 968 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 24 467 - -
Mal8g1985 968 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 736 960 - -
Mal8g1985 968 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 474 544 - -
Mal8g1985 968 SUPERFAMILY WRKY DNA-binding domain 636 700 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g1985 968 Pfam WRKY DNA -binding domain 639 698 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1985 968 SUPERFAMILY Cullin repeat-like 231 545 IPR016159 -
Mal8g1985 968 Pfam Exo70 exocyst complex subunit 347 467 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mal8g1985 968 Pfam Exo70 exocyst complex subunit 468 556 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mal8g1985 968 Pfam Exo70 exocyst complex subunit 783 957 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mal8g1985 968 SMART WRKY_cls 638 700 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1985 968 SUPERFAMILY Cullin repeat-like 771 960 IPR016159 -
Mal8g1985 968 PANTHER EXOCYST COMPLEX PROTEIN EXO70 736 960 IPR004140 GO:0000145|GO:0006887
Mal8g1985 968 PANTHER EXOCYST COMPLEX PROTEIN EXO70 474 544 IPR004140 GO:0000145|GO:0006887
Mal8g1985 968 Gene3D Exocyst complex component Exo70 225 468 - -
Mal8g1985 968 Gene3D Exocyst complex component Exo70 469 571 - -
Mal8g1985 968 Gene3D Exocyst complex component Exo70 738 967 - -
Mal8g1985 968 Gene3D WRKY domain 631 701 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g1985 968 ProSiteProfiles WRKY domain profile. 633 701 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1985 968 PANTHER EXOCYST COMPLEX PROTEIN EXO70 24 467 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1985 Mal-Chr8 41310134 41343196 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1985 747 967 EXO70 exocyst subunit family AT5G58430 40.756 1.82e-37 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal8g1985 Exo70 2e-38 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1985 - - cam:101500706 1186.02