Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1977 ATGTCACATATTCTAATCCAAACTTGGAGATGGGTGATGCAGCCAAAGGTGTGGAGATTTGTGGGCTTTGGTTCAGCTGTTGTTGGACTGCTCTGTTATGCTCTCAGCTCTTCCTTCAGCTATCTATTTGGAGAATGGAATTTGTTGAAAATATTTCTTTACAGCACTTTCAGTTTCATCATCTGCTTGGTGATTTTATTTGCAAAGAAATTGCAACATTCTAGAAGTCTCCAATTCAAAGCTCATTCAGCTTTTTTGGCATTGACACTCACTTCAGTCTATTCCTTTTTCTTTGATAAAGTTATGAACGGGAAACCAGATGCATATAGTCTAATTTCATGTGCTGCCTTTGCTATCATGTCACTTAGTTTGTCAAGGCAAACTCAGTGCGGATTTGAAGTCGATCTTCTTTATTTTTTCCTCGGATGTCTAATTGTACAACTCATGAAGATTAAATTGCAGTTATTCGTTCTTGGAGCGGGTTTTAGCTATTCCCTTATCATTCTCCGTGCTTCCTTTTCTTCGATAGATGCCAGAGAAAATAATCAATACAGCTCTGAACTCCAAGATGGGAATTCGGTGGTTCTTTATGTGGATTCTCTGCAATCGTCCAATGTTAATATTGCTAGTACTAGCAATAACATCGATTCACCACAATTGGTGATCAGTACTGATATTGGTAGTATGATGGAACAACTCGGGACTTGTGTGAAGGCGCTTGAGCACGAAAATTCAAATCTCATTCAAGTCATTTCGGAGCATGTAAAAAAGTATGTTGAAGAACACTCTCAATTGGTGGTGACCGATCCTAACCTAATGTTGGATGCGTTGAAGCCAGAAACCATCAAAGATCTTGAGGATATAGCAAAGGCTATGACGATGGCTGGGTTTGAGAAGGATTTTTCCGATGTCTACAACAATTGTCGGAGGGAATGCTTGGACAAGTGCCTAATGCATAGATTATTCTGCTTACAGAAGCTCAACATTGAGGATATTCACAATATGTCATGGAAGGAACTCGAAGTCGAGATTGAAAGATGGATTAGAACTTTCAATATCGCCCTCAAGATACTTTTCCCTGGTGAGCGAAGACTTTGTGATCGCATCTTCTTCGGATTCTCATCGGCGGCTGGTTTCTCCTTCATGGAAATATGCAGGGAATCCACCGTTAAACTTCTAAATTTTGTTGATTATGTGTCTAGTACTGGAATCCATTCGCCAGAGCGTTTGTTTAAAATCCTCGAGGTGTTTGAAACATTGCGCGACCTAATTCCTGAATTCGAATCCTTATTTAGTGATGAGTACAGCCTGTCTCTAAGGAATGAAGCAACTAAGATATGGAAGAGATTGGGAATAGCAATTAGAGACTTTTTCATGGAATTGGAGTACTTGATTGGCCGAGATCTAACAAAAGTGATAGATTATGGTGGTGGTGTTCACCCGATTACCCAACATGTGATGAACTACCTCCGTGTAGTTTGCCGATCCCAGCGAACATTGGAGCAAGTTTTTTACGATTCCTCACTTTTTTCGAAGATCCATAGTATTATCGGTATATTGGAGAGAAACTTAGAAGCAAAGTCCAAATGCTACGAGGACCCTTCATTAAGCTATATTTTCTTGTTGAATAACAACAAATATATAGTTGAGATGACCAGAGATAATGAACTAGGAACCCTTTTGGGGGATGACTGGTTCCGAAAACACACTCTGAAAGTTTCGGATTATCACCTACAATATCTAAAAACCAAGGGAACGATCGCCTCCACTCTAGTGCAAGTTTTTTTCCAGCCAAAAAATCATGGTGGGGATGTTCAACAATTATTGTACAGTACCCAACAAATTGGTGAAAGAAAAGGATCAACGGTGCATCAAGGAGATGTGCAAGAAATAGAAGCATCACCCTCGCAACCAGAAGAAAGGAGTTACTACATGTGCAACCACATGAAATTATATGTGTGTCGAGCCAAGAAGAAAGTACAACAACTTGGTGACAATCCAAATGTGTTTGAAGTAATATACAATGGTGGACATTCCTGCCGTATGTCCTTAACAATACCATCATTATTTGTACCAGAACCACAAGAACAACCATTGAATATCTCAATGGATATGACTCAAACCTACATGCCTTCATCGTCAACTTCTGGTGTGCTTTCATCGGGAATAGCAGAGGCCAAGTTAGCTTCTCCGGCGGACGGTGAGCATCATCCTATGATGGACAACATTTTGGATTATCTTGTTTTTGCTACAAAATCAAACAAGATCAAGGTTGTTAATGGAGAGGGAGCATTTTCAGCACAAACTGAGGGGACAATGGAACTGTTAGAGAGCATATTAGCATCAAAGTCCGAAGAATATGCGGACCCTTCTTTGCGTCATTTTTTCATGATGAATAATTGGAAATATTTAGAAGTGTCGAATAGGAGAAGGAAATTGAATGCAACTTTTGGCAATGATTGGTTACAAAAAACAAGAGAAAAAGTTCAGCAAAACATTGAACTCTATCAAAAAAACTCATGGGATAAGGTGTTAGAATTCTTGAAGTTGGATATCAATGACTCCATGGAAATTCATTTTGTTGTTGATTTGATGAAAGAAAAGCTTAGTTTGTTTAACAAGCACTTTACAGAGACATGCAAAGTTCAGTGCACATGGTCTGTTCGTGATTATAAGCTAAGGAAAGAAATAATTGAATCTCTCAAAAACATATTGTTGCCAGCGTATGGAATCTTCATTGGGAGGTTTCAGGATTTTCTTAAGAAAGATGCTTATGAGTATATTAAGTATGGAATGTTTGACATTCATGATGTACTTGATAATTTGTTTCTTGGAAACAAGAAAGACAAATGA 2853 0.3866 MSHILIQTWRWVMQPKVWRFVGFGSAVVGLLCYALSSSFSYLFGEWNLLKIFLYSTFSFIICLVILFAKKLQHSRSLQFKAHSAFLALTLTSVYSFFFDKVMNGKPDAYSLISCAAFAIMSLSLSRQTQCGFEVDLLYFFLGCLIVQLMKIKLQLFVLGAGFSYSLIILRASFSSIDARENNQYSSELQDGNSVVLYVDSLQSSNVNIASTSNNIDSPQLVISTDIGSMMEQLGTCVKALEHENSNLIQVISEHVKKYVEEHSQLVVTDPNLMLDALKPETIKDLEDIAKAMTMAGFEKDFSDVYNNCRRECLDKCLMHRLFCLQKLNIEDIHNMSWKELEVEIERWIRTFNIALKILFPGERRLCDRIFFGFSSAAGFSFMEICRESTVKLLNFVDYVSSTGIHSPERLFKILEVFETLRDLIPEFESLFSDEYSLSLRNEATKIWKRLGIAIRDFFMELEYLIGRDLTKVIDYGGGVHPITQHVMNYLRVVCRSQRTLEQVFYDSSLFSKIHSIIGILERNLEAKSKCYEDPSLSYIFLLNNNKYIVEMTRDNELGTLLGDDWFRKHTLKVSDYHLQYLKTKGTIASTLVQVFFQPKNHGGDVQQLLYSTQQIGERKGSTVHQGDVQEIEASPSQPEERSYYMCNHMKLYVCRAKKKVQQLGDNPNVFEVIYNGGHSCRMSLTIPSLFVPEPQEQPLNISMDMTQTYMPSSSTSGVLSSGIAEAKLASPADGEHHPMMDNILDYLVFATKSNKIKVVNGEGAFSAQTEGTMELLESILASKSEEYADPSLRHFFMMNNWKYLEVSNRRRKLNATFGNDWLQKTREKVQQNIELYQKNSWDKVLEFLKLDINDSMEIHFVVDLMKEKLSLFNKHFTETCKVQCTWSVRDYKLRKEIIESLKNILLPAYGIFIGRFQDFLKKDAYEYIKYGMFDIHDVLDNLFLGNKKDK* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1977 950 Pfam Exo70 exocyst complex subunit 734 940 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mal8g1977 950 Pfam Exo70 exocyst complex subunit 345 596 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mal8g1977 950 Gene3D WRKY domain 627 683 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g1977 950 PANTHER EXOCYST COMPLEX PROTEIN EXO70 26 582 IPR004140 GO:0000145|GO:0006887
Mal8g1977 950 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 732 943 - -
Mal8g1977 950 ProSiteProfiles WRKY domain profile. 638 683 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1977 950 SMART WRKY_cls 630 682 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1977 950 SUPERFAMILY Cullin repeat-like 731 943 IPR016159 -
Mal8g1977 950 Gene3D Exocyst complex component Exo70 201 612 - -
Mal8g1977 950 Gene3D Exocyst complex component Exo70 719 950 - -
Mal8g1977 950 SUPERFAMILY WRKY DNA-binding domain 638 682 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g1977 950 Pfam WRKY DNA -binding domain 637 681 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1977 950 Coils Coil 819 839 - -
Mal8g1977 950 SUPERFAMILY Cullin repeat-like 229 582 IPR016159 -
Mal8g1977 950 PANTHER EXOCYST COMPLEX PROTEIN EXO70 732 943 IPR004140 GO:0000145|GO:0006887
Mal8g1977 950 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 26 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1977 Mal-Chr8 40873780 40892244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1977 726 945 EXO70 exocyst subunit family AT5G58430 40.086 3.50e-35 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal8g1977 Exo70 1.1e-62 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1977 - - mtr:MTR_5g073620 1104.35