Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1976 ATGATGCCGGTGATCATCCAAATTCGGAGATGGCTGATGCAACCAAAGGTGTGGAGATTTGTGGGCTTTGCTTCATCTATTGTTGGACTGCTCTGTTTTGCTCTAAGCTCGTCCTTCAACTATCTATTTGGAAAATGGAATTTGCTAAAAATATTACTTTATAGCGTTTTCAGTTTCATCATTTGCTTGGTGATTTTATTTGCAAAGAAAATGCAACAGTCTAGAAGTCTCCGATACAAAGCTCATTCAGCTTTTTTGGTATTGACAATCACTTCAGTCTATTCCTTTTTCTTCGATAAAGTGGTGAATGGGAAACCAGATGCATATAGTCTAATTTCATGTGCCTCCTTTGCTATCATGTCACTTAGCTTGTCGACGCAAACACACTGCGGATTCGAAATCGATCTTCTTTACTTTTTCCTTGGATGTCTAATTGTGCAACTCATGAAGATTAAATCGATGTTATTCATTCTTGGAGCAGGTTTCAGCTATTCCCTTATCATTCTACGCTCTTCCTTTTCTTCAATAGATGATAGAGGAAATGGTCAGAACTCTGATCTCCAAGATGTAAATTCAGTGGTTCTTCATATGGATTCTTTACAATTGGCCAGTGCGGATATTGCTAGTGCTAGCAATAACATCGATTCACCACAACCGGTGATCAGTACTGATATTGGCAGTATGATGGAAAAACTCGGGACTTGTGTGAAGGCGCTTGAGAACGAAAATCCAAATCTCATTCAAATGCTTTCGGAGCATGTAAAAAAGTATGTTGAAGAACACTCTCAGTTGGTGGTGACCGACCCTAACTTAATGATAGATACGCTGAGGCCAGAAATCATCAAAGATCTTGAGGAAACAGCAAAGGTTATGGTGACGGCTGGGTTTGAGAAGGAATTTTCCAATGTGTACAGCAGTTGCCGCAGGGAATACTTGGACAAGGGATTAATGCAGAAACTCTTCGGTTTACGGATGCTGAGTACCGAGGACGTTCACAATATGCTGTGGAAGGATCTCAAAGATGAGATTGATAGATGGATTAAAGCTTTCAATTTAGCTATCAAGATACTTTTCCCTGGCGAGCGAAGACTCTGTGAACACGTCTTCTTCGGATTCTCATCAGCGGCTGATTTCTGCTTCATGGAGATTTGCAAGCAATCGACCACTCAACTTCTGAATTTTGTTGATTCTGTCGCCACTGGAAGCCCTTCGCCGGAGCGTTTGTTTAAAATGCTTGAGGTGTTTGAAACATTTTGTGGCCTAATTCCAGAATTTGAGTCATTATTTTGTGATCAATACAGCGTGTTTCTAAGAAATGAAGCAATTATGATATGGAACAGATTGGGGGAAGCAATCAAACGCATTTTCGTGGAGTTGGAGTATCTGATTGGTGGAGAACTGACAAATGAGACAGTTCTCGGTGGCGGTCTTCACCCGATTACCCAATATGTGATGAATTACGTTCGTGTAGTTTGCAGATCCCGACAAACATTAGAAAAAGTGTTTGAAAATTCTTCACTTTCTGGGGAGATGCAAAGGATTATGGATACATTGGAGAGTAATTTGGAAGCAAAGTCCAAATGCTACGAGGACCCTTCTTTAGGCTATATTTTCTTGATGAATAACAACACATACATATTTCAGATGACCAAAGATAATGAAGTTGGAATCCTTTTGGGGGATGATTGGTTCCGAAAACACAATATGAAAGTTTGGCACTACCATGAAGGAGATGTTCAAGAAATAGAAGCCTCACCCTCGCAACAAGAAGAAAGTAGGAAAAAGGTTTCGAAGACGAATGAAAGAACAATAGTGATCGCTCCCGCACCAGAGTTTGGGAACACAAATAAAATGCCACCGGAAGACGGGTTTAATTGGAGAAAATATGAACCGAAAAAGTTGATTCGCTTCAAATACCCAAGCAGGAAAAAGGTTTCGAAGACGGATGAAAGAACAATAGTGATCTCTCCCGCACCAGAGTTTGGGAACACAAAAAAAATGCCACCAGAAGACGGGTTTAATTGGAGAAAATATGGAGAGAAAGAGTTTATTGGCTTCGAATACCCAAGGAGTTACTACAGGTGCATCCACAGGAAATTATATGCTTGTCAAGCCACAAAGAGTGTACAACAACTTAAAGACATTCCCAAAGTGTTTGAAGTAAGATACTTAGGTGGACATTTATGCCGCATCCCCTTAACAATACCATCATTAATTTTACCAGCAAATGTCTCAAAGGATATGATTCAAACCACCAGGCCTCCATTGTCAACTTCATATTCTAAGTGGCTGTCATCGGGCACACCAGCCGAATTCATAAACTCTATCCCAATTGCCAAGGGAGCAGTTCCTACAGACGGTGGGCATCATCCAATGATGGACAACGTTGTGGACTATCTTGTTTCTGCTATAGGATCACAACAGATCAAGGTTGTTAATGAAGACGGAACATTTTCACTGTCAGCTCAAACAGAGGGGACGTTGGAACTGTTAGAGGGCATACTGGCATCCAAGTCCGAAAAATATGAGGACTATGCTTTGCGTAATTTTTTCATGATGAATAATTGGAGATATTTAGAACTGACTGATAAAAGAAAAGAATTGGATACAATTTTCGGCAACGATTGGATCCGAAAAATCAGAGCAAAAGTCCAACAAAGCCTTGAACTCTATCAAAGAAACTCATGGGATAAGGTAATGGAATTTTTAAAGTTGAATATAAATGAGTTCACGGAACCTAATGTTGCAGTAAATTCGATGAAAGAAAATCTCAGTTTGTTTTATAAGAACTATACAGAGACATGCAGAGTTCAGTGCACATGGTCTGTTCATGATTATAAGCTTAGGCAAGAAATAATTGAATCTCTCAGAAACACATTGCTGCCAGCGTATGGAATCTTCATTGGAAGGTTTCAAGATTTTCTTAAAAACGATGCTTATGAGTATATTAGGTATGGAATGTTTGACATTCATGACATACTTGATAATTTGTTTCTTGGAAACAAGAAAGACAACTGA 3018 0.3956 MMPVIIQIRRWLMQPKVWRFVGFASSIVGLLCFALSSSFNYLFGKWNLLKILLYSVFSFIICLVILFAKKMQQSRSLRYKAHSAFLVLTITSVYSFFFDKVVNGKPDAYSLISCASFAIMSLSLSTQTHCGFEIDLLYFFLGCLIVQLMKIKSMLFILGAGFSYSLIILRSSFSSIDDRGNGQNSDLQDVNSVVLHMDSLQLASADIASASNNIDSPQPVISTDIGSMMEKLGTCVKALENENPNLIQMLSEHVKKYVEEHSQLVVTDPNLMIDTLRPEIIKDLEETAKVMVTAGFEKEFSNVYSSCRREYLDKGLMQKLFGLRMLSTEDVHNMLWKDLKDEIDRWIKAFNLAIKILFPGERRLCEHVFFGFSSAADFCFMEICKQSTTQLLNFVDSVATGSPSPERLFKMLEVFETFCGLIPEFESLFCDQYSVFLRNEAIMIWNRLGEAIKRIFVELEYLIGGELTNETVLGGGLHPITQYVMNYVRVVCRSRQTLEKVFENSSLSGEMQRIMDTLESNLEAKSKCYEDPSLGYIFLMNNNTYIFQMTKDNEVGILLGDDWFRKHNMKVWHYHEGDVQEIEASPSQQEESRKKVSKTNERTIVIAPAPEFGNTNKMPPEDGFNWRKYEPKKLIRFKYPSRKKVSKTDERTIVISPAPEFGNTKKMPPEDGFNWRKYGEKEFIGFEYPRSYYRCIHRKLYACQATKSVQQLKDIPKVFEVRYLGGHLCRIPLTIPSLILPANVSKDMIQTTRPPLSTSYSKWLSSGTPAEFINSIPIAKGAVPTDGGHHPMMDNVVDYLVSAIGSQQIKVVNEDGTFSLSAQTEGTLELLEGILASKSEKYEDYALRNFFMMNNWRYLELTDKRKELDTIFGNDWIRKIRAKVQQSLELYQRNSWDKVMEFLKLNINEFTEPNVAVNSMKENLSLFYKNYTETCRVQCTWSVHDYKLRQEIIESLRNTLLPAYGIFIGRFQDFLKNDAYEYIRYGMFDIHDILDNLFLGNKKDN* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1976 1005 SUPERFAMILY Cullin repeat-like 217 576 IPR016159 -
Mal8g1976 1005 SMART WRKY_cls 669 731 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1976 1005 ProSiteProfiles WRKY domain profile. 670 732 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1976 1005 Pfam Exo70 exocyst complex subunit 770 995 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mal8g1976 1005 Pfam Exo70 exocyst complex subunit 345 575 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mal8g1976 1005 Gene3D WRKY domain 662 733 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g1976 1005 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 773 998 - -
Mal8g1976 1005 PANTHER EXOCYST COMPLEX PROTEIN EXO70 773 998 IPR004140 GO:0000145|GO:0006887
Mal8g1976 1005 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 25 576 - -
Mal8g1976 1005 SUPERFAMILY Cullin repeat-like 771 998 IPR016159 -
Mal8g1976 1005 Gene3D Exocyst complex component Exo70 764 1005 - -
Mal8g1976 1005 Gene3D Exocyst complex component Exo70 220 603 - -
Mal8g1976 1005 Pfam WRKY DNA -binding domain 670 729 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1976 1005 SUPERFAMILY WRKY DNA-binding domain 667 732 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g1976 1005 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 576 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1976 Mal-Chr8 40861478 40872351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1976 266 575 EXO70 exocyst subunit family AT5G58430 60.502 6.50e-118 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal8g1976 Exo70 1.1e-40 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1976 - - cam:101500706 1144.8