Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1963 ATGCCCATAAGAATTTCTAATAGACTTATACAGAAAAATCAATGGAGAATTTTAGGATTTTTTTCAAGTATCTTTGGATTCATTTCTTATGCATTGAGCTCTTCTTTCAAACATCTTTTTGGAAACTGGAACTTCATCAAAATCATTATTTACACTGTGGTAAGTTTCAGTATCAGTAGCATGATGTTATTTTTGAAAAAATGGAAACTTTCAAGGAGATTCTTGCTTAAAGCTCATTTGGGTGTTCTTCTTTTGTTACTCACATCTTTGTACTCTTTTGTATCTGATAAAGATTTGAAAGGAAAACCAGACCTATTGAGTCTGATTTCTTGTGCAGCTTTTGCTTTAATGTCTTTTTGCTTATCAAGGCAAATTGATCTTGGTTTTGAATCTGATCTCCTCAATTTCTTCCTTGGAATTCTAACTGTTCAATTGATGAAGATCAATTTGATGCTATCTATTGTTGCTGCAATCTTCTGCTATTCACTTATGATTCTTCGTTCGAAATTGGACTCGAGGCACGAAGTTGGACCTTTGAGAATGGAAGCTGATGATGTAACTATAGAAATTAATGCTTTAGATAACAATAGAAATAAGTCTTTAAGAAGAAGGTTGAATCATGATGATGGGTATAATTGGAAAAGATATGAAGAGAAAGTAGCAAAAGGAGCTGAAAATCAAAGAAGTTATTATAGATGTACATGGCCTAATTGTGTTGTGAAGAAAAAAGTTGAGAGAACTATAGATGGAGAAATTGTTGAAACACTATACAAAGGTACACATAATCATTGTAAGCCAATGTCTTCAATGAAGAGGAATTCCTCATCTGAGTATCTTTATTCACTTTTACCTTCTGAGACTGGCCCAATTGATTTTCCAGATCAATCATTTGGTAGTGAACAATTAGATTCTGATGAAGAACCTGCAAAGTCCTCAGTATCTATATGA 948 0.3281 MPIRISNRLIQKNQWRILGFFSSIFGFISYALSSSFKHLFGNWNFIKIIIYTVVSFSISSMMLFLKKWKLSRRFLLKAHLGVLLLLLTSLYSFVSDKDLKGKPDLLSLISCAAFALMSFCLSRQIDLGFESDLLNFFLGILTVQLMKINLMLSIVAAIFCYSLMILRSKLDSRHEVGPLRMEADDVTIEINALDNNRNKSLRRRLNHDDGYNWKRYEEKVAKGAENQRSYYRCTWPNCVVKKKVERTIDGEIVETLYKGTHNHCKPMSSMKRNSSSEYLYSLLPSETGPIDFPDQSFGSEQLDSDEEPAKSSVSI* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1963 315 Pfam WRKY DNA -binding domain 208 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1963 315 SMART WRKY_cls 207 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1963 315 MobiDBLite consensus disorder prediction 286 315 - -
Mal8g1963 315 SUPERFAMILY WRKY DNA-binding domain 205 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g1963 315 Gene3D WRKY domain 195 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g1963 315 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 3 271 - -
Mal8g1963 315 ProSiteProfiles WRKY domain profile. 208 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1963 315 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 271 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1963 Mal-Chr8 40666991 40667938 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1963 208 268 WRKY Transcription Factor Family AT2G38470 51.613 3.19e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal8g1963 WRKY 7.8e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1963 - - gmx:102667674 369.007