Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1958 ATGGCCACAACTTTCTCTGACCTTTTAGCTTCTCCACCTTCAGATGATAACAACAACAACAATTCAAGGGGTGTGCCAAAATTCAAGTCTACACCCCCTCCTTCTTTGCCTTTGTCACCTCCCCCTGTTTCTCCTTCTTCTTACTTTGCTATTCCTCCTGGTTTGAGTCCTGCTGAACTTCTTGATTCACCTGTTATGCTTAACTCTTCCAATATTTTGCCATCTCCAACAACTGGTGCTTTTGCTGCTCAAATCTACAATTGGAGGAACAATTCTGATGGGAATCAACAAATTGCAAAGGAAAATTTCACTTTTCAAAACCAACATGGGCCTGCTGTTACTGCATCCACAACAACTTTTCAATCATCAACAGTTGGTGGAGTTCAACAACAACAGCCATGGAGTTATCAAGAAAACACAAATCAGAATGGTTTTTCATCTGGAAACAATATGATACAAACTTCTGAAAACAACAATTCTTCAATGCAGAGTTTTTCTCCTGAGATTGCTAGTGTGCAAACCAACAACAACAATGGATTTCAATCAGATTACACCAATTACCAGCAGCAACCGCAACCGGCTCAAACCTTAAGCCGAAGATCAGATGATGGCTACAACTGGAGAAAATATGGACAAAAACAAGTGAAAGGAAGTGAGAATCCAAGAAGTTACTACAAATGCACATATCCTAATTGTCCTACAAAGAAAAAAGTTGAGAGATCAATTGAGGGACAAGTTACAGAGATAGTTTATAAGGGTACTCATAATCATCCTAAGCCTCAAGCTACTAGGAGAAACTCATCATCATCTTCTAATGCTCTTGTGATTGTTCCTGCAAATCCAATCAATGAGATTCATGATCAATCATATGCATCACATGGTAATGGACAAATGGATTCTGCTGCTACTCCTGAGAATTCTTCAATATCAATTGGAGGTGATGATGATTTTGAGCAGAGTTCTCATCAAAGGAGTAGATCAGGAGGTGGTGGTGATGAGTTTGATGAAGAGGAACCTGAGGCTAAAAGATGGAAGAATGAAGGTGAAAATGAGGGTATATCAGCTCAACCTGGAAGTAGAACAGTGAGAGAACCTAGAGTTGTTGTTCAGACAACAAGTGACATTGATATCCTGGATGATGGTTACAGGTGGAGGAAATATGGACAGAAAGTTGTTAAGGGAAATCCAAATCCAAGGAGTTACTACAAGTGTACACACCCTACCTGTCCAGTGAGGAAGCATGTCGAACGTGCCTCACATGATTTAAGGGCTGTGATCACAACATATGAGGGAAAACACAACCATGATGTCCCCGCTGCTCGTGGAAGCGGAAGCCATTCTGTGAACAGACCAATGCCAAACAATCCTTCAAATCCAAACAATGCTGGCATTGCCATAAGGCCTCTTCAGATGCAGAGGCCACAACAACCTCCACAGCAAGGACAATCACCATTCAATCTTCAGATGCTGCAGGGCCAAGGAAACTATGGATTCTCAAGGTTTGATAATCAAATGGTTCCTTACATGAATCAACAACAGCAGCAACAACAAATGTCTGAAAATGGTTTTTCCTCTAGAGCAAAAGAGGAACCTAAAGATGACATGTTCCCTGAATCTTTGCTTTGCTGA 1629 0.4101 MATTFSDLLASPPSDDNNNNNSRGVPKFKSTPPPSLPLSPPPVSPSSYFAIPPGLSPAELLDSPVMLNSSNILPSPTTGAFAAQIYNWRNNSDGNQQIAKENFTFQNQHGPAVTASTTTFQSSTVGGVQQQQPWSYQENTNQNGFSSGNNMIQTSENNNSSMQSFSPEIASVQTNNNNGFQSDYTNYQQQPQPAQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSIEGQVTEIVYKGTHNHPKPQATRRNSSSSSNALVIVPANPINEIHDQSYASHGNGQMDSAATPENSSISIGGDDDFEQSSHQRSRSGGGGDEFDEEEPEAKRWKNEGENEGISAQPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPTCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNPSNPNNAGIAIRPLQMQRPQQPPQQGQSPFNLQMLQGQGNYGFSRFDNQMVPYMNQQQQQQQMSENGFSSRAKEEPKDDMFPESLLC* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1958 542 MobiDBLite consensus disorder prediction 286 364 - -
Mal8g1958 542 Gene3D WRKY domain 190 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g1958 542 ProSiteProfiles WRKY domain profile. 202 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1958 542 SUPERFAMILY WRKY DNA-binding domain 200 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g1958 542 MobiDBLite consensus disorder prediction 472 524 - -
Mal8g1958 542 MobiDBLite consensus disorder prediction 1 28 - -
Mal8g1958 542 SUPERFAMILY WRKY DNA-binding domain 370 438 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g1958 542 MobiDBLite consensus disorder prediction 286 316 - -
Mal8g1958 542 MobiDBLite consensus disorder prediction 447 465 - -
Mal8g1958 542 SMART WRKY_cls 378 437 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1958 542 SMART WRKY_cls 201 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1958 542 MobiDBLite consensus disorder prediction 132 206 - -
Mal8g1958 542 MobiDBLite consensus disorder prediction 434 542 - -
Mal8g1958 542 MobiDBLite consensus disorder prediction 317 349 - -
Mal8g1958 542 MobiDBLite consensus disorder prediction 132 201 - -
Mal8g1958 542 Gene3D WRKY domain 365 431 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g1958 542 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 17 510 - -
Mal8g1958 542 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 510 IPR044810 GO:0003700
Mal8g1958 542 MobiDBLite consensus disorder prediction 1 44 - -
Mal8g1958 542 MobiDBLite consensus disorder prediction 30 44 - -
Mal8g1958 542 MobiDBLite consensus disorder prediction 251 271 - -
Mal8g1958 542 Pfam WRKY DNA -binding domain 379 435 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1958 542 Pfam WRKY DNA -binding domain 202 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g1958 542 ProSiteProfiles WRKY domain profile. 373 438 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1958 Mal-Chr8 40524434 40527809 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1958 199 541 WRKY Transcription Factor Family AT2G38470 56.901 1.93e-108 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal8g1958 WRKY 5.7e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1958 8 40524434 40527809 Mal8g1958 8 40524434 40527809 ECH
Mal2g2905 2 38737914 38742554 Mal8g1958 8 40524434 40527809 PCT