Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1952 ATGGAATCCCAAAATGGAGATAATGTTGCTTCCAATTTGCTCAAAGCTGAGAACCACATATGGAATTATATTTACAACTTCGTAAATTCCATGTCTCTTAAATGTGTAGTTGACTTAGGCATACCAGATATCATACACAGCCATGGAAAACCCATGTCACTCTCAAAACTCATTAGTTCAGTGCCTATCAACCCTTCAAAAACTAGTTTCATCTATCGCTTGATGCGAATCATGACTTATTCTGGCTTCTTCTCTCAACACAATGTAACTGAGAATGAGCTGGAAACTGAGTATATATTAACAGATGTATCTATATTACTACTTAAGGACAATCCAATGAGTGTGGCACCATACGTGCACGCGATGCTCAGTCCGCTTATGATGAATCCATGGCATCAATTCTCTGCTTGGTTAAAAAATGATGATATTACAACATTTGAAATGACACATGGGATGCCGTTTTGGGATTATGCTGCGCATGACACCAAATTTAACAACTTATTTAATGAGTCAATGTCAAATGATGCTCAATTAGTTTCATATTTGTTGGTTGAAAAGTGTAAGGGAGTGTTCAATGATGTTGAGTCATTGGTTGATGTTGGAGGAGGTACAGGGACTATGGCAAAGGCTCTTGCCAAATCATTCCCACAAATGGAGTGCATTGTTTTTGATCTCCCACATGTTGTTGATGGCTTGCAAGGAAGTGAGAAACTAAGATATGTTGTTGGGGACATGTTGAAAGAAATTCCGCCAACAGATGCAATTTTGTTGAAGTGGGTATTGCATGACTGGAATGACGAGGACACTGTAAAGATATTAAAGAATTGTAAGGATGCAATATCAAAGAAAGGTAAAGAAGGGAAGGTGGTTATCATAGACATGGTGGTGGACACTGAGAAGGGAGAAATTAATGAATCAGTTGAAACACAACTCTTTTTTGATATGGTGATGATGGTAGTACTTGCTGGAAAAGAGAGAAACAAGAAAGAATGGGTTAAGTTAATTTTCTCGGCCGGTTTTAGTGACTACAAGATAACTCCAATTTTAGGAACAAGATCTGTGATTGAGATCTATCCATAA 1080 0.3778 MESQNGDNVASNLLKAENHIWNYIYNFVNSMSLKCVVDLGIPDIIHSHGKPMSLSKLISSVPINPSKTSFIYRLMRIMTYSGFFSQHNVTENELETEYILTDVSILLLKDNPMSVAPYVHAMLSPLMMNPWHQFSAWLKNDDITTFEMTHGMPFWDYAAHDTKFNNLFNESMSNDAQLVSYLLVEKCKGVFNDVESLVDVGGGTGTMAKALAKSFPQMECIVFDLPHVVDGLQGSEKLRYVVGDMLKEIPPTDAILLKWVLHDWNDEDTVKILKNCKDAISKKGKEGKVVIIDMVVDTEKGEINESVETQLFFDMVMMVVLAGKERNKKEWVKLIFSAGFSDYKITPILGTRSVIEIYP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1952 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 357 IPR029063 -
Mal8g1952 359 CDD AdoMet_MTases 197 296 - -
Mal8g1952 359 PANTHER O-METHYLTRANSFERASE 8 359 - -
Mal8g1952 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Mal8g1952 359 Gene3D Vaccinia Virus protein VP39 108 359 IPR029063 -
Mal8g1952 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 359 IPR016461 GO:0008168
Mal8g1952 359 PANTHER O-METHYLTRANSFERASE 8 359 IPR016461 GO:0008168
Mal8g1952 359 Gene3D - 2 107 IPR036388 -
Mal8g1952 359 SUPERFAMILY "Winged helix" DNA-binding domain 11 112 IPR036390 -
Mal8g1952 359 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Mal8g1952 359 Pfam O-methyltransferase domain 131 341 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1952 Mal-Chr8 40332037 40333449 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1952 45 359 Monolignol Biosynthesis Gene Families AT1G51990 33.333 4.47e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1952 - K16040 gmx:100807238 518.464