Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1949 ATGGAATCCCAAAGTGAAGAGAATGTTGCTTCCAATTTGCTCAAAGCTCAAAGCCACATATGGAATCACATTTTCAATTTCATAAATTCCATGTCACTTAAATGTGTAGTTGACTTAGGCATACCTGATATCATACACAACCATGGAAAACCTATGCCACTCTCAAAACTCATTTCTTCACTATCAACCCACCCTTCAAAAAACCACGGCATCTATCGCTTGATGCGAATCATGACTCACTCTGGCTTCTTCTCTCAACAAAATGTTACAGAGAATGAGCTAGAAATTGAGTATATGTTAACTGATGCATCTAAATTATTACTTAAGGACAATCCAATGAGTGTAGCACCATACGTGCACGCAATGATCAATCCAGTTATGATGAATCCATGGCATCAATTCTCTGCTTGGTTAAAAAATGATGATACTAACACATTTGAGATGACACACGGGATGTCGGCATGGGAGTATGCTGCTTGTGACTCCAAAATTAACAACTTATTTAATGAGTCAATGGCAAATGATACTCAATTAATTTCCGATTTGTTGGTTGAGAAGTGCAAGGGAGTGTTCAATGAAGTTGAGTCATTGGTTGATGTTGGAGGAGGCACAGGGACCATGGCAAAGGCTCTTGCTAAATCATTCCCAGAATTGGAGTGTACTGTGTTTGATCTTCCACATGTTGTTGATGGCTTGCAAGGAAGTGAGAACCTAAGATATGTTGGTGGGGACATGTTTAAAGAAATTCCTCCTGCAGATGCAATTTTATTGAAGTGGATATTGCATGACTGGAACGACGAGCAATGTGTGAAGATTTTAAAGAATTGTAAGGATGCAATATCAAAGAAAGGTAAACAAGGGAAGGTGGTTATCATAGACATGGTGTTGGACAATGAGAAGGGAAACAATAATGAATCAGTTGAAACACAACTCTTCTTTGATATGTTGATGATGGTAGTACTCACAGGAAAAGAGAGAAACGAGAAAGAATTGGTTAAGTTGATTTCTTCGGCCGGTTTTTGTGACTACAAGATAACTCCAATTTTAGGCTTAAGGTCTATGATTGAGATCTATCCATAA 1080 0.3824 MESQSEENVASNLLKAQSHIWNHIFNFINSMSLKCVVDLGIPDIIHNHGKPMPLSKLISSLSTHPSKNHGIYRLMRIMTHSGFFSQQNVTENELEIEYMLTDASKLLLKDNPMSVAPYVHAMINPVMMNPWHQFSAWLKNDDTNTFEMTHGMSAWEYAACDSKINNLFNESMANDTQLISDLLVEKCKGVFNEVESLVDVGGGTGTMAKALAKSFPELECTVFDLPHVVDGLQGSENLRYVGGDMFKEIPPADAILLKWILHDWNDEQCVKILKNCKDAISKKGKQGKVVIIDMVLDNEKGNNNESVETQLFFDMLMMVVLTGKERNEKELVKLISSAGFCDYKITPILGLRSMIEIYP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1949 359 Pfam O-methyltransferase domain 131 340 IPR001077 GO:0008171
Mal8g1949 359 Gene3D Vaccinia Virus protein VP39 108 359 IPR029063 -
Mal8g1949 359 Gene3D - 1 107 IPR036388 -
Mal8g1949 359 PANTHER O-METHYLTRANSFERASE 8 359 - -
Mal8g1949 359 CDD AdoMet_MTases 197 296 - -
Mal8g1949 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Mal8g1949 359 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Mal8g1949 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 359 IPR016461 GO:0008168
Mal8g1949 359 SUPERFAMILY "Winged helix" DNA-binding domain 11 112 IPR036390 -
Mal8g1949 359 PANTHER O-METHYLTRANSFERASE 8 359 IPR016461 GO:0008168
Mal8g1949 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 357 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1949 Mal-Chr8 40226871 40228764 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1949 31 345 Monolignol Biosynthesis Gene Families AT5G54160 33.438 1.19e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1949 - K16040 gmx:100781008 535.028