Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1932 ATGTTTGGATGTCCAGAGACAGGGACAGAAAGATTAGATGAAATAGCAAAAATCAACTCAGAGGGAGAAACATCTTCTCAAATGGGAAGGAAGCATTTTTATGGTCCAACTTCTGGGACAACCTTAAACACAGTAACCCCTTGTGCTGCATGTAAGCTATTGAGAAGAAGATGTGCTGAGGAATGCCCTTTCTCTCCTTATTTTTCACCACATGAACCTCAAAAATTTGCAGCTGTTCATAAAGTCTTTGGTGCTAGCAATGTCTCTAAATTGCTATTGGAGGTACCTGAAGGACAAAGAGCAGATGCAGCAAATAGCATGGTTTATGAAGCTAATTTGAGGTTAAGAGATCCTGTTTATGGATGCATGGGTGCAATATCATCATTACAACAACAAGTACAATCTTTACAAGCAGATCTACATGCAGTTAGAACTGAGCTACTAAAATACAAATATAGAGAAGCAGCTAGTTTTATTTCTTCTCAAGTAACATCAATGCCTACAAATAATGCAAACTCACAAGGTCTTTCTCAACCTCTTTCTCTTCCTAATTCTCTAGCTCCTTTATCTCCTTCTCTTCCTCCACCACCAAAACCATTACCTTCTCAATCTATTAATATCCTTTCGTCGTTGTCTTCCTCTTCTGCTTCTTCTTCTGTTTACACTTCACCTAAAACAACAATGAGTCATGGATCTATTTCTAGTGAAAATATTCCATATTTTGTTTAG 729 0.3759 MFGCPETGTERLDEIAKINSEGETSSQMGRKHFYGPTSGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKLLLEVPEGQRADAANSMVYEANLRLRDPVYGCMGAISSLQQQVQSLQADLHAVRTELLKYKYREAASFISSQVTSMPTNNANSQGLSQPLSLPNSLAPLSPSLPPPPKPLPSQSINILSSLSSSSASSSVYTSPKTTMSHGSISSENIPYFV* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1932 242 MobiDBLite consensus disorder prediction 169 205 - -
Mal8g1932 242 Pfam Lateral organ boundaries (LOB) domain 47 143 IPR004883 -
Mal8g1932 242 ProSiteProfiles LOB domain profile. 46 147 IPR004883 -
Mal8g1932 242 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 32 241 - -
Mal8g1932 242 PANTHER LOB DOMAIN PROTEIN 32 241 - -
Mal8g1932 242 MobiDBLite consensus disorder prediction 188 202 - -
Mal8g1932 242 MobiDBLite consensus disorder prediction 169 187 - -
Mal8g1932 242 Coils Coil 126 146 - -
Mal8g1932 242 MobiDBLite consensus disorder prediction 219 236 - -
Mal8g1932 242 MobiDBLite consensus disorder prediction 219 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1932 Mal-Chr8 39743442 39744843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1932 28 162 AS2 family AT2G30340 77.206 4.45e-73 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal8g1932 LOB 5.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1932 - - ccaj:109795340 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1932 8 39743442 39744843 Mal8g1932 8 39743442 39744843 ECH