Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1930 ATGGAGAATACATCAAAAGTCTTGATGCAAAAATATGAGTTAGGAAGATTACTAGGCCAAGGAACTTTTGGAAAAGTTTACTATGGAAGGAGTACAATAACTAACCAAAGTGTAGCTATTAAAATGATTGATAAAGATAAGGTTATCAAAAATGACCAAGCTGATAGTATAAAAAGGGAAATATCTGTTATGAGACTTATGAAACATCCAAATATTATAGAGCTTTTTGAGGTCATGGCAACAAGGAGTAAAATTTACTTTGTTATTGAATATGCTAAAGGCGGCGAGCTTTTCAAAAAGGTAGCAAAAGAAAAGCTGAAAGATGATATTGCACACAAATATTTCAAGCAGTTAATTAGCGCAGTTGATTATTGTCATAGTAGAGGTGTATACCATAGAGACATCAAGCCAGAGAACATTTTATTAGATGAGAATGAGAATCTGAAAGTATCAGATTTTGGTTTAAGTGCTTTTGCTGAATCCAAAAGGCAAGATGGTTTGTTGCATACAACTTGTGGAACACCTGCTTATGTTGCTCCTGAGGTGATCAAAAGGAAGGGTTATGATGGTTCAAAAGCTGATATTTGGTCTTGTGGAGTTGTTCTTTTTGTTTTACTAGCTGGTTATGTACCTTTCAATGATTCAAATTTGATGGAAATGTATAGGAAGATAAGTAAAGCAGAGTTTAAGTGTCCTATTTGGTTTCCAAAAAATGTTAGGAAACTTTTGAGTAAGATGTTGGATCCAAATCCTGACACAAGGATTTCTATTGATAAGATTAAACAGTGTTCTTGGTTTAAGTATGGTTCAAATGGTAGACACAAAAAACTTAAAGAGACAATCTCTTCTTTGGCTACAAACTCCGCAGCACCGGCATGTCTTATTGAAGGCATGTCTGATGTTCAAAACTTGTCAGTGTCAGACATGTCCAACACAACACCGACACATGTGGCAATTCATTCTGATGAAAGGGATGAAACTGAAAAGCAAGAGTCAGTTGTGCCTTTGAGTATTAATGCATTTGATATTATCTCTCTTTCGTCTGGTTTTAATCTTTGTGGATTCTTTGAAGATAGTTTTCAGAAAAGGGAAGCGAGATTTACTTCGAGACAACCTGCATCAATCATTATTTCGAGGCTGGAAGAGATTGCTAAGAGACTGAAGATGAAAATAAAGAAAAGGGCTGCTGGTTTGTTGAAATTAGAGGGAGTTGATGAAGGTAGAAAAGGGGTTTTGTCTATTGATGCTGAAATCTTTGAGGTTACTCCATTTTTTCATTTGGTTGAGGTGAAAAAATCAAATGGTGATACATTGGAATATCATAAAATATTGAATGATGATATTAGGCCTGCTCTACAAGATATTGTTTGGGTTTGGCAAGGTGAATTACAAGAACAATCACAACAGTCAGAGCAGCAGCAGTAA 1425 0.3523 MENTSKVLMQKYELGRLLGQGTFGKVYYGRSTITNQSVAIKMIDKDKVIKNDQADSIKREISVMRLMKHPNIIELFEVMATRSKIYFVIEYAKGGELFKKVAKEKLKDDIAHKYFKQLISAVDYCHSRGVYHRDIKPENILLDENENLKVSDFGLSAFAESKRQDGLLHTTCGTPAYVAPEVIKRKGYDGSKADIWSCGVVLFVLLAGYVPFNDSNLMEMYRKISKAEFKCPIWFPKNVRKLLSKMLDPNPDTRISIDKIKQCSWFKYGSNGRHKKLKETISSLATNSAAPACLIEGMSDVQNLSVSDMSNTTPTHVAIHSDERDETEKQESVVPLSINAFDIISLSSGFNLCGFFEDSFQKREARFTSRQPASIIISRLEEIAKRLKMKIKKRAAGLLKLEGVDEGRKGVLSIDAEIFEVTPFFHLVEVKKSNGDTLEYHKILNDDIRPALQDIVWVWQGELQEQSQQSEQQQ* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1930 474 Pfam NAF domain 335 393 IPR004041 GO:0007165
Mal8g1930 474 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Mal8g1930 474 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1930 474 CDD CIPK_C 339 453 - -
Mal8g1930 474 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Mal8g1930 474 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 471 - -
Mal8g1930 474 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1930 474 ProSiteProfiles NAF domain profile. 333 357 IPR018451 GO:0007165
Mal8g1930 474 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1930 474 Gene3D Transferase(Phosphotransferase) domain 1 2 336 - -
Mal8g1930 474 Gene3D Kinase associated domain 1, KA1 337 458 - -
Mal8g1930 474 PANTHER - 2 471 - -
Mal8g1930 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1930 Mal-Chr8 39677924 39679348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1930 1 465 CBL-interacting serine-threonine protein kinases AT5G58380 65.161 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mal8g1930 Pkinase 9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1930 - K07198 gmx:100779316 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1930 8 39677924 39679348 Mal8g1930 8 39677924 39679348 ECH
Mal8g1930 8 39677924 39679348 Mal2g2947 2 40330485 40331885 ECH
Mal3g2452 3 96000391 96001776 Mal8g1930 8 39677924 39679348 ECH
Mal7g0915 7 25134408 25135805 Mal8g1930 8 39677924 39679348 ECH
Mal2g2947 2 40330485 40331885 Mal8g1930 8 39677924 39679348 PCT