Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1927 ATGGGTGAAGTGATTTTACTAGCAACTGTAAGGATTTATGGACAAATGGATGCAGAGATAGTTTTCGTGGCCACCAAGGAACAATATCGAGGAAAAGGACTGTGTCATTTGTTGATGACTGAGCTTCAGAAACAGTTGACTCACTTAAGAGTAGAAAACTTGGTTTTGCATTCATCAGAGGATGCTACAGACACTTGGACAAAATCAGTTGGTTTTGCTAGGATGAGGGCTAAAAACAAGTGCAAATTTATTGATTATACTTTCTTTGAATTTCAGAACATTGTCATGTGCCTTAAATCACTAAGGTGA 309 0.3754 MGEVILLATVRIYGQMDAEIVFVATKEQYRGKGLCHLLMTELQKQLTHLRVENLVLHSSEDATDTWTKSVGFARMRAKNKCKFIDYTFFEFQNIVMCLKSLR* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1927 102 Pfam Acetyltransferase (GNAT) family 9 72 IPR000182 GO:0016407
Mal8g1927 102 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 95 IPR000182 GO:0016407
Mal8g1927 102 Gene3D - 1 97 - -
Mal8g1927 102 CDD NAT_SF 2 57 - -
Mal8g1927 102 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 7 102 - -
Mal8g1927 102 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 7 102 - -
Mal8g1927 102 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 75 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1927 Mal-Chr8 39609353 39609661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1927 3 102 PHD Transcription Factor Family AT5G63900 35.000 1.07e-15 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mal8g1927 Acetyltransf_1 1.1e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1927 - - mtr:MTR_5g024390 154.066