Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1917 ATGTTTTCCACCATGCTCACAAATGGAATCCCTTCAAAACCCCACCTCCACAAACCCCATTTCCAACACTTCCAAATCCGTTGCGGAATCCGCGAAATCCGCGACCGAATCAACAGCGTCAAAACCACCCAAAAAATCACCGAAGCAATGAAACTCGTCGCCGCCGCTAGAGTCCGTCGCGCACAAGAAGCCGTTATCAACTCCCGCCCCTTCTCCGAAACCTTCGCCGAACTCCTCCATTCCATCAACCAATCCCTCCAGAACGACGACGTTGTCGTCCCCTTATCCGCCGTCCGTCCCGTTAAAACCGTCGCACTCATCGTCATCACCGGTGACCGTGGCTTATGCGGCGGATTCAACAACTCCGTCGCTAAAAAAGCCGAAGCCCGAATAGCGGAATTGAAGAATCTTGGTATCAATTGTGTTGTTATTAGTGTTGGAAAAAAGGGTAGTTCTTATTTTAACCGTAGGAGTTTTGTTGAGGTTGATAGGTTTATCGATAATGTCGGTTTTCCGACAACAAAAGAGGCACAAATCATTGCTGATGATGTTTTTTCGCTTTTTGTTAGTGAGGAAGTTGATAAAGTTGAACTTGTTTACACAAAGTTTGTTTCTTTAGTTAGGTTTAATCCAGTGATTCAAACATTGTTACCGTTGTCGAAAAAAGGCGAAGTTTTTGATGTTAATGGGAATAGTGTTGATGCTTTGGAAGATGAGTTTTTTAGGTTAACTTCAAAGGATGGAAAATTGGCTTTGAAGAAAGATGTGAAGAAGAAGAAAATGAATGATGGGTGTGTTCCGGTTATGGAATTCGAGCAAGATCCTGCTCAGATTCTTGATGCAATGATGCCACTTTATTTGAATAGTCAAATTTTGAAGGCATTGCAAGAATCATTGGCTAGTGAACTTGCTGCTAGAATGGGTGCTATGTCGAATGCTACTGATAATGCTATTGAGTTGACAAAGGAACTTTCTGTTGCTTATAATAGGGAAAGACAAGCTAAGATTACTGGTGAGATTTTGGAGATTGTTGCTGGAGCTGAAGCATTAAGACCAATTGATTGA 1065 0.4254 MFSTMLTNGIPSKPHLHKPHFQHFQIRCGIREIRDRINSVKTTQKITEAMKLVAAARVRRAQEAVINSRPFSETFAELLHSINQSLQNDDVVVPLSAVRPVKTVALIVITGDRGLCGGFNNSVAKKAEARIAELKNLGINCVVISVGKKGSSYFNRRSFVEVDRFIDNVGFPTTKEAQIIADDVFSLFVSEEVDKVELVYTKFVSLVRFNPVIQTLLPLSKKGEVFDVNGNSVDALEDEFFRLTSKDGKLALKKDVKKKKMNDGCVPVMEFEQDPAQILDAMMPLYLNSQILKALQESLASELAARMGAMSNATDNAIELTKELSVAYNRERQAKITGEILEIVAGAEALRPID* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1917 354 PANTHER ATP SYNTHASE GAMMA CHAIN 12 354 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal8g1917 354 CDD F1-ATPase_gamma 30 347 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal8g1917 354 Gene3D - 93 221 - -
Mal8g1917 354 PRINTS ATP synthase gamma subunit signature 297 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal8g1917 354 PRINTS ATP synthase gamma subunit signature 194 211 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal8g1917 354 PRINTS ATP synthase gamma subunit signature 101 120 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal8g1917 354 PRINTS ATP synthase gamma subunit signature 328 349 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal8g1917 354 Pfam ATP synthase 30 350 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal8g1917 354 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 29 350 IPR035968 GO:0015986|GO:0045261|GO:0046933
Mal8g1917 354 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 30 350 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal8g1917 354 Gene3D ATP synthase, gamma subunit, helix hairpin domain 28 92 - -
Mal8g1917 354 ProSitePatterns ATP synthase gamma subunit signature. 336 349 IPR023632 -
Mal8g1917 354 Gene3D ATP synthase, gamma subunit, helix hairpin domain 252 350 - -
Mal8g1917 354 Hamap ATP synthase gamma chain [atpG]. 27 350 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal8g1917 354 PANTHER F0F1 ATP SYNTHASE SUBUNIT GAMMA 12 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1917 Mal-Chr8 39377879 39378943 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1917 2 351 Primary Pumps ATPases AT1G15700 69.774 1.24e-172 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1917 K02115 - qsu:112000322 458.373