Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1914 ATGGAACACATGACAAATATTGGAGATGGAGTAAATGATGAAAATGTGTTGTTTGGTATGATGGAAAGAGGCGGTGGCGGTGGCGGAGAGGGTGGCAATGGTGGTGGTGGTGGAGGAGGTGGTGACGAGGCGAATATGAAAAAGGGTCCTTGGACAACAGCAGAGGATGCAATTTTGATAGATTATGTGACAAAACATGGTGAAGGGAATTGGAATGCTGTTCAAAGGAATACAGGTTTGAATCGTTGTGGGAAGAGTTGTAGGCTTAGATGGGCTAATCATTTAAGACCCAATTTGAAGAAAGGTGCATTTTCTCATGAAGAAGAGAAACTCATTGTTGAACTTCATGCTCAATTTGGTAACAAATGGGCTAGAATGGCTGCATTGTTACCCGGAAGAACGGACAATGAAATAAAGAACTACTGGAACACAAGGATCAAACGTCGTCAGAGACAAGGACTTCCTCTCTATTCAGACGAACATGATCGTCCCAACACACCGACCACACCAACAACAACTTCACCTTGTGTCACACCAACAGGAAGAAACCCTAACAACATTACAACAAAGTTTGAATTTTTCAATCAAAACCAATATCAACAACACCATCACCACCTTCACCCTTTATCTCCAACACCAACCAATCATCATTCTCCTCTCTCTTCACCACTCCAACATAGACAACAACATTCTTATTCTCCTCACACATTCTTGGACACTTCACCTGCACCATTGTCATCTTCTTCACCATCACCAATCTCCTTCACTTTCCAAAGACCTGCACCACTCTTATCTACACCTCTTTGCTTCAAACGATATCGTTCGTCTCCAAACTTTAGCCTTCAAGTCCCTTCAATGACACAAAATTGCTCCTCTTCACTCCATGATCCTTGTTTAACCTCTCATCATGATAGTTTCCGGTTCCCGATTCAATACAACTCGAGTTTTTCTCAATACTTTCATACTCCTTTGTTGGAATCCGATCGAGGAGTTTCTTCTTCTTCATTGTCTCCTCCTTTCTCAACAAAGTTGGAGCTACCTTCAAACCAATATTCAAGACTATCCTCAGAACAAGATATTAAGCCTAATAATCTTGAGTTCAATGATCCTAATTCTTTTCAGAACAATAATAGTGGCTTAATGGGAGATCTTTTAATGGAAGCACAAACACTAGCATCTGGCCAAAATTCAAAGAAAAGAAGTTACTTGAGCTTAAATGAAGGAAATGACATTTTTAATAGTTGTCAAAGCCTGGATGATTTTCCACTTAGCTCTGTTTATTGGTCTTCTAATTCAGGACAAAAAGCAAAGGAAGAAGCACCAGACCTAAGCAAATTTATGAATGATGACATGTCAACAATGCTAACTGTGATGCCTTCTTCAACAATGCAAAGTCAAGATTGGAATAACAATAACAATAGCAATGCATCAGAAGTAACAAATGTTCAATCTTCTAGTGGTGTGATGGGAGATGAAAATTTTGGACTTGATATCAAGCCTATAGCTTCATTGTTTCCTCTCACAGACACAACAACAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGAAAATGAAAATAATGGTTGCTACACTTGGGACAATTTACCTGAACTCTGCTAA 1674 0.3763 MEHMTNIGDGVNDENVLFGMMERGGGGGGEGGNGGGGGGGGDEANMKKGPWTTAEDAILIDYVTKHGEGNWNAVQRNTGLNRCGKSCRLRWANHLRPNLKKGAFSHEEEKLIVELHAQFGNKWARMAALLPGRTDNEIKNYWNTRIKRRQRQGLPLYSDEHDRPNTPTTPTTTSPCVTPTGRNPNNITTKFEFFNQNQYQQHHHHLHPLSPTPTNHHSPLSSPLQHRQQHSYSPHTFLDTSPAPLSSSSPSPISFTFQRPAPLLSTPLCFKRYRSSPNFSLQVPSMTQNCSSSLHDPCLTSHHDSFRFPIQYNSSFSQYFHTPLLESDRGVSSSSLSPPFSTKLELPSNQYSRLSSEQDIKPNNLEFNDPNSFQNNNSGLMGDLLMEAQTLASGQNSKKRSYLSLNEGNDIFNSCQSLDDFPLSSVYWSSNSGQKAKEEAPDLSKFMNDDMSTMLTVMPSSTMQSQDWNNNNNSNASEVTNVQSSSGVMGDENFGLDIKPIASLFPLTDTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNENENNGCYTWDNLPELC* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1914 557 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 150 IPR017930 -
Mal8g1914 557 MobiDBLite consensus disorder prediction 462 488 - -
Mal8g1914 557 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 31 513 - -
Mal8g1914 557 ProSiteProfiles Myb-like domain profile. 96 146 IPR001005 -
Mal8g1914 557 MobiDBLite consensus disorder prediction 162 251 - -
Mal8g1914 557 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 31 513 - -
Mal8g1914 557 Gene3D - 47 100 - -
Mal8g1914 557 MobiDBLite consensus disorder prediction 507 549 - -
Mal8g1914 557 MobiDBLite consensus disorder prediction 18 49 - -
Mal8g1914 557 CDD SANT 50 95 IPR001005 -
Mal8g1914 557 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 95 IPR017930 -
Mal8g1914 557 Pfam Myb-like DNA-binding domain 48 95 IPR001005 -
Mal8g1914 557 Pfam Myb-like DNA-binding domain 101 144 IPR001005 -
Mal8g1914 557 SMART sant 47 97 IPR001005 -
Mal8g1914 557 SMART sant 100 148 IPR001005 -
Mal8g1914 557 CDD SANT 103 144 IPR001005 -
Mal8g1914 557 SUPERFAMILY Homeodomain-like 45 142 IPR009057 -
Mal8g1914 557 MobiDBLite consensus disorder prediction 152 251 - -
Mal8g1914 557 MobiDBLite consensus disorder prediction 507 550 - -
Mal8g1914 557 Gene3D - 103 149 - -
Mal8g1914 557 ProSiteProfiles Myb-like domain profile. 43 95 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1914 Mal-Chr8 39351625 39354469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1914 25 513 MYB Transcription Factor Family AT4G26930 35.887 1.59e-68 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal8g1914 Myb_DNA-binding 5.4e-14 CL0123