Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1888 ATGAATAAGATTTTGGTTTGGTTTCATCGATTTGTCGTGTTCTTGTTGCTTACAAGGATTTCTTCACTTCCACACACTGATGATGGTCATGTAAATTCAAATTCTGCAAGAAATCTGAATCAGGAGCAGGGTGATGATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAATAGCTTGGAAGATCATTCAAGAGTATTTAACGCCATTTGTGGAGAAAGAAAAATATAATATCTCGAGAAGATGCAGGCTTCACCCTGACAATGATATATATAGAGATCAAGAACAACATAAATCTCATGTAGATATAAGTGAATGGCAGTGTGGATACTGTAAGAAAACTTTCTATGAAGAGAAACATCTTGATCAGCATTTCGACAACAGACACTCCAATTTACTTAATTTGAAAGAAAGCCGGTGCTTAGCAGATGTATGTGGAGCACTGCACTGTGACCATGAAATTAATTCCGGGTCAAAAAAATCAAAGTGCAATCCTCCTGCTGCAGCAAGGAATAAGCATCTATGTGAGACCATAGCCGATAGTTGTTTTCCAGTTAACGAGGGTCCTGCAGCGAGCCGGCTTCATGAATTCTTCTTGCATCAATTCTGTGATGCTCACAGCTGCACTGGAAGTGGAAAGCCTTTCTCCAGAGGACGTAAGAAAAAGACAAATGTGTTCTACATAGTTGCCTCCATTTTTCTTCTGATGTTGCTGTTACTTTACTATCTCTACATTTATTTATATCAGAGAGGATTGAAAAAGGAAACTCAAATGCTGAGGCGTATCTCACAAGCCGGCCGAAAAAAGAAGCCATCATAA 819 0.3871 MNKILVWFHRFVVFLLLTRISSLPHTDDGHVNSNSARNLNQEQGDDHQIHCSRERSRIAWKIIQEYLTPFVEKEKYNISRRCRLHPDNDIYRDQEQHKSHVDISEWQCGYCKKTFYEEKHLDQHFDNRHSNLLNLKESRCLADVCGALHCDHEINSGSKKSKCNPPAAARNKHLCETIADSCFPVNEGPAASRLHEFFLHQFCDAHSCTGSGKPFSRGRKKKTNVFYIVASIFLLMLLLLYYLYIYLYQRGLKKETQMLRRISQAGRKKKPS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1888 272 MobiDBLite consensus disorder prediction 27 46 - -
Mal8g1888 272 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 272 - -
Mal8g1888 272 ProSitePatterns Zinc finger C2H2 type domain signature. 108 129 IPR013087 -
Mal8g1888 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 131 IPR013087 -
Mal8g1888 272 MobiDBLite consensus disorder prediction 27 42 - -
Mal8g1888 272 SUPERFAMILY Expressed protein At2g23090/F21P24.15 95 131 - -
Mal8g1888 272 PANTHER ZINC FINGER PROTEIN-RELATED 4 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1888 Mal-Chr8 38648562 38652400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1888 29 272 C2H2 Transcription Factor Family AT5G63280 62.602 2.15e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal8g1888 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1888 - - lang:109338698 454.136