Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1857 ATGAACAACAACTCTCCATTCGGTGCTTCTGCTTCTATTCCACCTTCTCCCGCTTCTTCCAACTCTTCTCTCATGGCTTCGTCTTCCTCTGAACAACTCGTTCTCGAACTCTCCAATCCTGAACTCCGTGAAAATGCTCTTCTCGAACTTTCTAAGAAGAGGGAGCAATTTCAAGATCTTGCTCCATTGCTATGGAATTCATTTGGTACTATTGCAGCACTTTTGCAGGAAATTGTTTCAATATACCCTGTTTTGTCTCCTCCCAACCTCACTCCAGCACAATCAAATCGAGTGTGCAATGCTCTTGCCCTGCTCCAGTGTGTAGCATCTCACCCTGATACAAGGATGCTATTCCTGAACGCACACATTCCTCTGTATTTGTATCCGTTCCTGAACACAACAAGCAAATCGAGACCTTTTGAGTACTTGAGGCTTACTAGTCTTGGTGTCATCGGTGCATTGGTGAAGGTTGATGATACCGAGGTTATTAGCTTTCTGCTTTCGACTGAAATAATTCCCCTGTGCCTGCGTACCATGGAGATGGGGAGTGAGCTCTCCAAAACAGTTGCAACATTTATTGTTCAAAAGATTCTGTTGGATGATGTGGGCTTGGACTATATTTGTACTACAGCTGAGCGCTTTTTCGCAGTTGGTCGAGTTCTGGGAAACATGGTGGCAGCTCTTGCTGAGCAACCATCATCTCGTCTGTTGAAGCATATCATTCGATGCTATCTTCGCCTTTCAGATAACCCAAGGGCTTGTGATGCATTAAGGAGCTGTCTTCCTGACATGTTAAGGGACTCTACATTCAGCAGCTGCCTTCGTGAAGACCCAACAACAAGGAAGTGGCTGCAACAACTGATTCACAATGTTGGAGGGAATAGGGTTCCTGCACTGCAAGGTGGAGGAGGTTTTGATCATCTAATGGTGAATTGA 936 0.453 MNNNSPFGASASIPPSPASSNSSLMASSSSEQLVLELSNPELRENALLELSKKREQFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDSTFSSCLREDPTTRKWLQQLIHNVGGNRVPALQGGGGFDHLMVN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1857 311 Pfam Cell differentiation family, Rcd1-like 33 291 - -
Mal8g1857 311 PANTHER UNCHARACTERIZED 5 308 - -
Mal8g1857 311 MobiDBLite consensus disorder prediction 1 25 - -
Mal8g1857 311 Gene3D - 23 292 IPR011989 -
Mal8g1857 311 SUPERFAMILY ARM repeat 35 265 IPR016024 -
Mal8g1857 311 PANTHER BNAA05G20110D PROTEIN 5 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1857 Mal-Chr8 37738056 37746757 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Mal8g1857 Rcd1 1.1e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1857 K12606 - gmx:100792784 546.584