Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1843 ATGGAGAAAGTAGATCATACCTCCAATAAACCCTCTGAAATCATCCCAATGGCTTTTCCTCCTTACCGTCGATCTCACTTCCGTAGCCAAACTTACACCACCCTTGTCCGTATTCTCTCCAAACTCTCTCCTTCAAATGTTCCTGATAATGGCAATGTTGGAGTGGGGCAAGAAAACCAGGAAAAGGAGCCCGAGTGCTCTGAGTTAAAAGTTGGTTCTGATGTTGAGGATCCCAAAGGTCCAATACCCTTGAAGGAAATACATGATGTCCACGAGACCATTGAAAGTGTTACAGACAATGCCAAGGATTTGAGTGCCGATGCAATGGTTCTTGATGATGCAGCAGAATTTCTGATGGGAGGAGAGGAACCATCCACTCAAACAGATGGTTTTCATTTGGAACAAATGCTAATGGACGAGTTGGAGCTTGTTGTGAAAGGGACTGAAGATCCAGTTTCTGATAATGGTTTAATCCCCTTGAACTGCGAGAAACAAAATAGCGGTAGTGAAGTTGATTTGTTGGATTACCGAGAAGAGCATGTTGAATTTCTGCATTCTGGTACAAACACGTCTGAAAGTGTAAGTGAGGTGCAGTTGCAAGTACAAGGGGAGCTTAATCGACTTGACTCGGAAAGCTTTCATGCGTCCGAGTCAACAAAGGGACAAGCTTCCGATTCCATAATTAGTAGTACATCAAGTATAAAGAATGAAAGACAACAAAAGGAAACAGAAATGGTAACACCGGTTTGTCCTCCGGCGGGATCTCTTCCTACTATTCAAGAGGGTGAATTTGAGAAGGAAGAACAGTATGGTCATAAGGTTGATGAAGCAACTCATAGTTCTTTAGATCATGATACAAATATTGAAGCATTGAATATGATAGAAGACGGTGGATTACTGGATTCTACAATTTTGAAAGATAAATACGAAACACAAAATGGAGAGAAATCAGAGAAGTTCATTTGTTTGAAAGATACCACAAATTCTTCTGATATTCTGATTGAAGAAGGTGATCTAGAAGAGGGAGAAGTTTCTGGAGACTTTGAGATGGATGGAAACACATTTGATGTGTCATCTGCCGATACTATAGTTTCAGAACCGACGAAATTGGATGAGATTGAGAAACCCGGCAATTCACTTGGAAATACGGTATCTCCTTTCAATATGGGTATCTCTTTTCAAGGTTTTCCATCTATCAAAGATCACGGGAACTCGTCTGTAGTACAGCAGATGTTTGGTGCTAGCGGTAAGGAACAAAGTGGTCTTGTCCCTAAGAAGGAAAAGAAAAAGGAGGTGATTGATGCCAGTAGAAAGCGAAAATGTGCTCCTGATTCTGAGGAGAAGGAAGATGAAAATAAGCAGATGGTTGATGCCAGTGGGAGTAAACGTGGTCCTGGTTCTCAGGAGAAGAAAACTAGAAAGAGGAAGAAGAATCGAAAGAAGAGAGCAGAAAAGAACAACGAACATGGTGCTAAAAGGTTGAAGTTGAATCCAGTACAAAAACCGAAACCTATTCCAAATTGCCGCCATTATATGAAAGGAAGATGCCATGAGGGTGACAAGTGCAATTTCTCACATGATGCTATTCCTTTAACAAAGTCCAAGCCATGTAGTCACTTTGCTCAGCACTCTTGTATGAGAGGGGATGATTGTGCATATGATCATCAGCTTTCCAAGTATCCTTGTTCCATTTTTGTGTCTAAAGGCTCTTGTCATAGAGGTCATGCTTGTATGTTCTCACACCAGGTGCCAACCAGCCAAGATATACCTACGCCTATAAATGCTGGCAAACCAGAGTTGAAGTCTCCTCTTTCGTCTGGAAATACTAATTTCCGTACACCACTGAATAATTATGGCACTGGTTCTGTCCAACAAAACAAAGTCACCAATTCTAAGGGAACTTATTCTCACACCAATGTAGAACATAAGGTGACAGACATTTCACAGATAAAGCCTACCTCAACACCCAAAGGAATTGCATTTCTAAATGTTGCTAACTTTTCACTTAGTACACCAAAACAGGACACAGTAACACCAAACAAGAGAAATCTTATCCACAGTGGAACATGTGCAGATAAAGGTCAAAATACTGCGGAAAGTTCTAAAAAAATTCCATCTGTCATGCCCAAGGGAGTTAATTTTCTTTCTTTCGGTAAAGGTTCTGTATGCAGTTTTAAACGTTCAATTCAATCCACTGCAGAAGGAATGATATTGAAGTTGCCTCAGTCAGTCAATTTTGGTTTGTCTGAACATTCAATTTCATCTCTGAATAAAGATGATTATGGAAAAGCTAGTGACAGAACTGCACAAACTGCACTATTCTCACATGAGATTTCAGACAAAGATCAGTCCATGGCAGAACGAATGAAATCAAGGTTTCTTGGGAAAGATGCAACCGGTGATTCTGTGAGGGATCACAACCATTGTAAATCAGTTCAAGAGGTAGGAAAGGCATCCGATAATTCTCAGACTTCAACTGTGACCTCAGCTACACTTGCTAGTTCCTTTGTTTCACATCAGTCTTCCGAAGGCCTAGTATCTGGATGTCATAAACAAGCATCGAACTTAGGCCAAAGGGCACTCTTGTCAACTTTAGCTTTTGCAGCGGAGCATGAATCAGATATTAAGATGAAATGCCATACTGGTGCTTCACCTGTATGA 2661 0.4081 MEKVDHTSNKPSEIIPMAFPPYRRSHFRSQTYTTLVRILSKLSPSNVPDNGNVGVGQENQEKEPECSELKVGSDVEDPKGPIPLKEIHDVHETIESVTDNAKDLSADAMVLDDAAEFLMGGEEPSTQTDGFHLEQMLMDELELVVKGTEDPVSDNGLIPLNCEKQNSGSEVDLLDYREEHVEFLHSGTNTSESVSEVQLQVQGELNRLDSESFHASESTKGQASDSIISSTSSIKNERQQKETEMVTPVCPPAGSLPTIQEGEFEKEEQYGHKVDEATHSSLDHDTNIEALNMIEDGGLLDSTILKDKYETQNGEKSEKFICLKDTTNSSDILIEEGDLEEGEVSGDFEMDGNTFDVSSADTIVSEPTKLDEIEKPGNSLGNTVSPFNMGISFQGFPSIKDHGNSSVVQQMFGASGKEQSGLVPKKEKKKEVIDASRKRKCAPDSEEKEDENKQMVDASGSKRGPGSQEKKTRKRKKNRKKRAEKNNEHGAKRLKLNPVQKPKPIPNCRHYMKGRCHEGDKCNFSHDAIPLTKSKPCSHFAQHSCMRGDDCAYDHQLSKYPCSIFVSKGSCHRGHACMFSHQVPTSQDIPTPINAGKPELKSPLSSGNTNFRTPLNNYGTGSVQQNKVTNSKGTYSHTNVEHKVTDISQIKPTSTPKGIAFLNVANFSLSTPKQDTVTPNKRNLIHSGTCADKGQNTAESSKKIPSVMPKGVNFLSFGKGSVCSFKRSIQSTAEGMILKLPQSVNFGLSEHSISSLNKDDYGKASDRTAQTALFSHEISDKDQSMAERMKSRFLGKDATGDSVRDHNHCKSVQEVGKASDNSQTSTVTSATLASSFVSHQSSEGLVSGCHKQASNLGQRALLSTLAFAAEHESDIKMKCHTGASPV* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1843 886 Gene3D - 474 531 - -
Mal8g1843 886 MobiDBLite consensus disorder prediction 468 483 - -
Mal8g1843 886 Gene3D - 532 590 - -
Mal8g1843 886 ProSiteProfiles Zinc finger C3H1-type profile. 531 558 IPR000571 GO:0046872
Mal8g1843 886 MobiDBLite consensus disorder prediction 415 506 - -
Mal8g1843 886 MobiDBLite consensus disorder prediction 46 81 - -
Mal8g1843 886 Pfam CCCH-type zinc finger 508 527 IPR041367 -
Mal8g1843 886 SMART c3hfinal6 559 583 IPR000571 GO:0046872
Mal8g1843 886 SMART c3hfinal6 531 557 IPR000571 GO:0046872
Mal8g1843 886 SMART c3hfinal6 503 528 IPR000571 GO:0046872
Mal8g1843 886 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 216 883 IPR045124 GO:0003723|GO:0045892
Mal8g1843 886 MobiDBLite consensus disorder prediction 215 236 - -
Mal8g1843 886 SUPERFAMILY CCCH zinc finger 504 527 IPR036855 GO:0046872
Mal8g1843 886 MobiDBLite consensus disorder prediction 212 258 - -
Mal8g1843 886 MobiDBLite consensus disorder prediction 61 81 - -
Mal8g1843 886 MobiDBLite consensus disorder prediction 421 457 - -
Mal8g1843 886 ProSiteProfiles Zinc finger C3H1-type profile. 502 529 IPR000571 GO:0046872
Mal8g1843 886 ProSiteProfiles Zinc finger C3H1-type profile. 561 584 IPR000571 GO:0046872
Mal8g1843 886 PANTHER PROTEIN SUPPRESSOR OF SABLE 216 883 - -
Mal8g1843 886 MobiDBLite consensus disorder prediction 673 703 - -
Mal8g1843 886 SUPERFAMILY CCCH zinc finger 560 585 IPR036855 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal8g1843 zf-CCCH_4 7.1e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1843 - - mtr:MTR_3g053340 1145.57