Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1834 ATGGGTCGTGGAAACGGCACCACCGCAACAACTGCGGCTGAACCTGGTTCAAACCCGGTTTTTTTCAAAGAGCCGAGATACAGAGGCGTTAGAAAAAGACCGTGGGGCCGGTTCGCCGCCGAGATCAGAGACCCTTTGAAGAAAGCAAGAGTTTGGCTCGGAACGTTCGACACGGCGGAACAAGCGGCGCGTGCATACGACACCGCCGCTAGAAACCTCCGGGGACCAAAAGCCAAGACGAATTTTCCTCTTCAACAGCCTTTTTACCATAATCTTGACGCCGGAGATCCGTTTTCCGATCAACGTTTCTTCACCGGCGCCGGTGCCGGAGTTGTTGCCGGTGAGTATCAAGATCATCGGAGACCTACTTCATCTGGCATGAGCAGCACCGTTGAGTCTTTCAGCGGTCCACGTCCAGTTGCTCCTCCGGCGCCGCCGTCTGTAGTTGCCGGAAGAAGGTACCCACGTACACCACCGGTTGCTCCAGAGGATTGCCGTAGTGACTGTGATTCATCATCGTCGGTGGTTGATGACGGCGACAACGACAACGCGGCTTCGTCGGTGATGCTTTCGTTCAAACGCGCTCCGCTGCCGTTTGATCTCAACGCGCCGCCGTTGGAGGATGCTGACGTGGCAGGTGGTGAGGATCTGCACTGCACCGTTCTATGCCTCTGA 675 0.5644 MGRGNGTTATTAAEPGSNPVFFKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDTAEQAARAYDTAARNLRGPKAKTNFPLQQPFYHNLDAGDPFSDQRFFTGAGAGVVAGEYQDHRRPTSSGMSSTVESFSGPRPVAPPAPPSVVAGRRYPRTPPVAPEDCRSDCDSSSSVVDDGDNDNAASSVMLSFKRAPLPFDLNAPPLEDADVAGGEDLHCTVLCL* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1834 224 MobiDBLite consensus disorder prediction 121 135 - -
Mal8g1834 224 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 199 - -
Mal8g1834 224 SUPERFAMILY DNA-binding domain 26 84 IPR016177 GO:0003677
Mal8g1834 224 Gene3D AP2/ERF domain 26 85 IPR036955 GO:0003700|GO:0006355
Mal8g1834 224 MobiDBLite consensus disorder prediction 1 15 - -
Mal8g1834 224 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Mal8g1834 224 Pfam AP2 domain 25 75 IPR001471 GO:0003700|GO:0006355
Mal8g1834 224 CDD AP2 25 83 IPR001471 GO:0003700|GO:0006355
Mal8g1834 224 PANTHER ETHYLENE RESPONSE FACTOR 1 199 - -
Mal8g1834 224 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Mal8g1834 224 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Mal8g1834 224 MobiDBLite consensus disorder prediction 1 21 - -
Mal8g1834 224 MobiDBLite consensus disorder prediction 167 184 - -
Mal8g1834 224 MobiDBLite consensus disorder prediction 118 184 - -
Mal8g1834 224 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1834 Mal-Chr8 37202673 37203347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1834 1 224 AP2-EREBP Transcription Factor Family AT3G20310 55.823 1.16e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal8g1834 AP2 5.4e-15 CL0081