Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1796 ATGGCTGATGCCTTACTTGGAGTTGTGTTTGAGAATTTGTTGTCTCTTGTTCAAAATGAATTTGCAACCATTTATGGAATCAAATCAAAGGCTCTAAAGCTTTCAACCACCTTAGATTTGGTCAACGCTGTTCTTGAAGATGCTGAGCAGAAGCAAGTCACAAATCGCTCTATAAAGGTATGGCTACAACAACTCAAGGATGCTGTATATGTGCTTGATGATATCCTTGATGAGTGCTCCATCGGGTCTAGTCGACTTCGAGGCTCATCCTCTTTCAAACCAAAGAACATCATGTTTCGCCGTGAGATCGGCAAAAGGTTGAAAGATATTACAAGAAGATTAGATGATATTGCTGAAAGTAAGAACAAGTTTCATCTACGGGAGGGTGGAACTGTTAGGGAAAGTTCAATTGAAGTAGCAGAATGGCGTCAAACCAGCTCCATTATTGCTGAACCAAAAGTATTTGGACGAGAAGATGATAAAGAGAAGATTGTCGAGTTTCTTCTCACCCAAGCAAGGGACTCTGACATTCTTACTGTCTATTCCATTGTTGGTTTAGGTGGTGTTGGAAAAACAACGCTTGTTCAATTGGTCTACAATGATGTTAGGGTTAGTAGCAATTTTTATACAAAAATTTGGGTTTGTGTTTCTGAGACTTTCTCGGTCAAGAGGATTTTCTGTTCCATTATAGAATCTATCACAAGAGAGAAGTATGATGGCTTTAATTTAGATGTAATACAAAGAAAGGTGCAAGAATTGTTGCAAGGTAAAATATATTTGCTGATTTTGGACGATGTGTGGAACAAAAATCAGCAATTGGAATTTGGATTAAGCCAAGAGAAATGGAATATATTGAAATCTGTGTTATCGTGTGGATCCAAAGGTAGTTCCATTTTAGTGTCCACTCGTGATGAGGTTGTTGCGACGATCATGGGAACATGCCACACTCATCCTTTGCATGTTCTCTCTGATAATGAATGTTGGTTGTTGTTCAAACAATATGCGTTTGGACATAACAGAGAAGAGCGTGCAGAGCTTGTGGCAATAGGAAAGGAGATAGTAAAGAAATGTGATGGATTGCCTCTTGCAGCACAAGCATTGGGAGGTCTAATGAGCTCAAGGAGTGAAGAAAAAGAATGGCTTGAAATTAAAGAGAGTGAGCTTTGGGCTTTACCACATGAGAATTATATTTTGCCTGCTTTGAGGTTGAGCTACTTTCATTTAACTCCAACCTTAAAGCGGTGTTTCGCTTTTGGTGCTATGTTTCCCAAAGATACAGAAATCATGAAGGAAGAATTGATTCATCTTTGGATGGCTAATGAATTGATTTTATCTAGAGAAAATATGGAGGTTGAAGATGTTGGCAGCATGGTTTGGAATGAATTGTGCCAAAAATCATTTTTTCAAGACATCAAGATGGATAACCATTCAGGAGACATTTCTTTTAAGATGCATGATCTTGTCCATGATCTTGCTCAATCAATAATGGGTCAAGAATGTATGTATTTGGAGAAGGCAAACATGACTAGTTTGTCAAAAAGCACACACCACATAAGTTTTCACTCTGATGACCTGTTATCATTCAAAAAGGGTGCCTTCAAGATAGTTGAATCCTTGCGAACATTGTTTCAGTTGAATCATTACACCGAAACAAAGCATGGTTACTCCCCAACAAATCGATCTCTACGGGTTTTATGCACATCCTCTATCCATATACCATCACTAGGGAGCTTAATTCACTTAAGGTATTTGGAACTTCGTTCTCTTGACATAAAAATGTTGCCAGACTCAATTTACAACTTACAAAAACTAGAAATCTTGAAAATTAAAGGTTGTCAAAAACTTAGTTGTCTTCCGAAAGGCTTGGCTTGTTTACTGAATCTCAGACATCTTGTCATTAAAGATTGCCATTCATTGTTTCATATGTTTCCTTACATTGGAAAATTAACCTGTCTAAGAACATTAAGTGTGTACATTGTTAGTTTAGAGAAAGGGAATAGCTTGACAGAGTTACATGATCTAAACCTGGGAGGAAAACTGAGTATCAAAGGCTTAAATGATGTTGGTAGTATATCTGAAGCTCAAGAAGCCAACTTGATGGCCAAAAAAGACCTAGAAGAATTATGTTATTCATGGACCAGCAATGACGTATTTACAAAGACCCCTACTATTAGTGTTGAGCAACTATTTGAAGTGTTGCAACCTCACTCAAATCTCAAGAGGTTGATAATTTGTCACTATAACAGATTTTTCTTACCAAGTTGGATAAGTATTCTTAGTAACTTAGTTGCTCTTGTACTTTGGAATTGCGAGAAATGTGTGCGGCTTCCGTCATTTGGTAAACTACAATCTTTGAAAAAACTCGCATTACACAATATGTATGATCTGATATACTTGGATGATGATGATGAAGAATCTCCCTGTGCTATGGAGGTGAGGGTTTTCCCATCTCTAGAGGTACTCATATTAGAAATCCTACCTAACTTAGAAGGGTTATTGAAAGTGGAAAGAGGGGAGATGTTTCCTTGTCTTTCTCGTTTGACAATCTCCTTTTGCCCTAAACTTGGACTGCCATGTCTTCTATCTCTTAAAAACCTCGATGTATTGGGATGTAACAATGAGTTGCTGAGGTCAATCTCTAGCTTCCATGGTCTGAACAACCTTACCCTTGATGGAGGTAAAAGAATAACATCCTTCCCTGAAGGGATGTTCAAAAACCTTACTTGTCTTCAAGCTCTTGATGTGAGTAATTTTCCAAAATTGAAGGAGTTACCAAATGAACCATTTAGCCTAGTTATGGAGCATCTGATAATCTCTTCATGTGATGAGCTTGAGTCTTTACCGGAGCAAATTTGGGAAGGTCTGCAATCCCTTCGAACTCTAGATATTTGTTGTTGTAAAGGATTGAGATGCTTGCCGGAAGGTATTCAACATCTCAATTCTCTTGAGCTTTTGACAATTCGTGGTTGTCCAACATTAAAGGAGCGATGCAAGGAGGGAACAGGAGAGGACTGGTACAAGATATCACATATTCCGATATTAAAGATTTTGTGA 3054 0.3802 MADALLGVVFENLLSLVQNEFATIYGIKSKALKLSTTLDLVNAVLEDAEQKQVTNRSIKVWLQQLKDAVYVLDDILDECSIGSSRLRGSSSFKPKNIMFRREIGKRLKDITRRLDDIAESKNKFHLREGGTVRESSIEVAEWRQTSSIIAEPKVFGREDDKEKIVEFLLTQARDSDILTVYSIVGLGGVGKTTLVQLVYNDVRVSSNFYTKIWVCVSETFSVKRIFCSIIESITREKYDGFNLDVIQRKVQELLQGKIYLLILDDVWNKNQQLEFGLSQEKWNILKSVLSCGSKGSSILVSTRDEVVATIMGTCHTHPLHVLSDNECWLLFKQYAFGHNREERAELVAIGKEIVKKCDGLPLAAQALGGLMSSRSEEKEWLEIKESELWALPHENYILPALRLSYFHLTPTLKRCFAFGAMFPKDTEIMKEELIHLWMANELILSRENMEVEDVGSMVWNELCQKSFFQDIKMDNHSGDISFKMHDLVHDLAQSIMGQECMYLEKANMTSLSKSTHHISFHSDDLLSFKKGAFKIVESLRTLFQLNHYTETKHGYSPTNRSLRVLCTSSIHIPSLGSLIHLRYLELRSLDIKMLPDSIYNLQKLEILKIKGCQKLSCLPKGLACLLNLRHLVIKDCHSLFHMFPYIGKLTCLRTLSVYIVSLEKGNSLTELHDLNLGGKLSIKGLNDVGSISEAQEANLMAKKDLEELCYSWTSNDVFTKTPTISVEQLFEVLQPHSNLKRLIICHYNRFFLPSWISILSNLVALVLWNCEKCVRLPSFGKLQSLKKLALHNMYDLIYLDDDDEESPCAMEVRVFPSLEVLILEILPNLEGLLKVERGEMFPCLSRLTISFCPKLGLPCLLSLKNLDVLGCNNELLRSISSFHGLNNLTLDGGKRITSFPEGMFKNLTCLQALDVSNFPKLKELPNEPFSLVMEHLIISSCDELESLPEQIWEGLQSLRTLDICCCKGLRCLPEGIQHLNSLELLTIRGCPTLKERCKEGTGEDWYKISHIPILKIL* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1796 1017 PRINTS Disease resistance protein signature 357 371 - -
Mal8g1796 1017 PRINTS Disease resistance protein signature 180 195 - -
Mal8g1796 1017 PRINTS Disease resistance protein signature 253 267 - -
Mal8g1796 1017 PRINTS Disease resistance protein signature 599 615 - -
Mal8g1796 1017 Gene3D - 321 403 IPR042197 -
Mal8g1796 1017 PANTHER OS05G0414200 PROTEIN 31 993 - -
Mal8g1796 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 417 IPR027417 -
Mal8g1796 1017 CDD RX-CC_like 2 119 IPR038005 -
Mal8g1796 1017 Gene3D Ribonuclease Inhibitor 932 1000 IPR032675 -
Mal8g1796 1017 Gene3D Ribonuclease Inhibitor 859 931 IPR032675 -
Mal8g1796 1017 Gene3D Ribonuclease Inhibitor 664 858 IPR032675 -
Mal8g1796 1017 Gene3D Ribonuclease Inhibitor 499 663 IPR032675 -
Mal8g1796 1017 Gene3D - 137 316 IPR027417 -
Mal8g1796 1017 PANTHER DISEASE RESISTANCE PROTEIN RP 31 993 IPR044974 GO:0006952
Mal8g1796 1017 Gene3D - 404 495 IPR036388 -
Mal8g1796 1017 Pfam Rx N-terminal domain 6 96 IPR041118 -
Mal8g1796 1017 Gene3D - 6 118 - -
Mal8g1796 1017 Pfam NB-ARC domain 157 385 IPR002182 GO:0043531
Mal8g1796 1017 SUPERFAMILY L domain-like 812 994 - -
Mal8g1796 1017 SUPERFAMILY L domain-like 483 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1796 Mal-Chr8 36367348 36370401 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1796 183 646 WRKY Transcription Factor Family AT5G45050 21.797 6.46e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1796 - - mtr:MTR_5g071220 1801.95