Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1779 ATGGAGGTTGATGGTGATAAGAGTGATAATGGAAATCGAAAACGTAAAAGAGGGTTGTTGAAAAGAAAGCTTCTTGTCAATGAAAAAGTTGAGCTGAGGAGTTTGGAAGATGGTTTTCTGGGATCGTGGCATCCGGGGAAAATTATCCGCTGCGGGAAGAAGACGCGTTATGTCAAATATGACAATATTCTTGATGATGAAGAATCAAATTATCTTATTGAAGTAGTAGATGTTTCTAGTGTTTTGGATGGTGTTAATTCTTCATCTGCTTTAGATTGTGGCTATCAACGCGGCCTGATTAGACCATTACCGCCTCCAATCGAGTTACGGATAAAGGATCTTCCATTCGGACAATGTGTTGATGTGAAATATCAGGATGCTTGGTGGGAAGGTGTGATATTCGATCGCTGTGACGGAATGAAAGAGAGGAGCATATTCTTCCCAGATTTAGGTGATGAAATGAAGGTTGGAGTTAAACAATTGAGGATCACACAGGATTGGGATGAATCAACTGAGAATTGGTTGCAAAGAGGGAAATGGGTTTTTCTTGAGTTGTTTGAGGAGTGTGAGAGGGTATCCTATGTTGCAGTGTCGGTGAAACAGATTTGGTATGATATTAGGATGAGAAAGGATTTTGCTGAAACCATTAGAGAATGGACTTGTAATGTGAAAGAATTGTGGAGAGATCTTGTTGTTGAGGTAATTGGTGATTACTATACCCTCACATTAACTGAAGTTCGCCCCGCCTTAAACCTTCCGAAGAATTTACTCGAAGAAGGGTCATTTCAACCAACTGATAATGTTCATTGTGAAGGGTCATTTGAACCAACTGATATTGTTCATTGTGATGCTGCTAATCATTGTAATGCCTTTGATTCTGACACTGGAATATCTGATAAGCCTAAGGAAAATGGTGACTCCTCAAACTTGTTGGTTACTGATCAAAACTGTGGCAGCACAAGTATCATTCCTTCGGTGGATGAGGAATTGGAGAAGGAAATTATTTTACATGGAGAGCTTGAATCAGATAAAAATCGAAAACGGAGACGTTCTAACTCCATAATTTGGAAACCTTTGGTACTGTCTGAAGTTGAATTCTGTCCTGAAGTAATTGATGAGTATGCACTTGGATGTAGAAGCAAGACGGTTCGGGAGCTTTTGAAGACGAAAGTAAGAAAACATCTTGCTTATCTTGGATGGACAATTGAATGGACTGAAAACAATTCTCCTCCACATAGACGATACCGGTACAAATCACCGGATAAACTTGATCCGAAGTCTTACACTTCAATTTTTCAAGTTACTAAAATTTTGCAAGAGGATCCAAACATGAACTCTGTGCCACCTCAAATTGACAGCAGTCTCTCACATCTGCTCTCTGATCCACCCCAAATGAGCCAAGGTTTCGACGTTTGTCCTCCAACCAAGGAACCTTCTCCAGTTAAAGTTAAAGTTGAACCAGAATTTTGTCCCCTAGCCATCGTGAAATACTACTTTCACACATTAGAGAGAAACTCGGCTGATAAGAGACAGTGGAAATTGAAGGCGAAAAAACATCTGTTAGCAGAAGGATGGATCTTTGACTACCCAACTGAAAGAAGGAGGACAACTTTGTACAAGTCTCCACAAGATCAGTGTTTAGGCACACTTCGAGGTGCATGCAGACTATACCTTAAAGAAAAGATTCCCGAATGGACTAATTCTGATCATCGTGGTGATGATCTACTTTCGAGTGTGTCCCAATTGCTTCAAAAAGAGCCTGAATTGTGTACAATAGATGGTTCAGCACCAACTGCAAAGAGAAAACATAAACGTGCAAGGACTTCAAAGGCTAGCGCACAAAAGGACCTAGAGAATGAAGTACTTACCCGGGTGCTAAGATCAAGCAAAAGGGTGCAGAAGGTTTTGGGTTCGTCACATCAAAAGCCTCAAAATATTCTGTCTTGGTTAATAGATTGCAACATTGTATTGCCAAAGTACAAGGTCTTTTACTGGGAAACCGAAGGAGGAAACTCTCCTACGTTTGAGGGGAGGATAACTCGCGAAGGAATTAGGTGCACCTGTTGTCAGAATCTATATGGACTCGGCGGCTTTGCAAACCATGCTGGTGGAAGCAGTAACCGCAGGCCTTCGGCTTGTATATTTTTGAAGGATGGTAGGTCACTGTTAGATTGCATGAGGGAAGTAATGCAAGATCACAGGACAAGGGAAATTACGGAGAAACCGCACAATGATCTGTTTGAAGGTGAAAATGACAACATTTGTTCTGTTTGTAACTACGGTGGTGAACTTATTTTATGCGACCAATGCCCCTCGGCGTTTCATAAGAATTGTCTTAATTTGGAGGGCATCCCTGATGGTGATTGGTTTTGCCCATCATGCCGTTGCGGGATTTGCGGACAAAACAAAGTTGAAGAGACTGAGGATGGACATTTTCTTACTTGCATTCAGTGTGAACATAAATATCATGTTGAGTGCCTCAGAAATGGAGCAAAAGAGGATTCGAGACGATATATGAAAAATTGGTTCTGTGGAGAAGAATGTGAAAGGGTCTATACGGGGCTCCAAAATCTACTAGGAAAGCCAGTTTTAGTGGGGGAGGACAATCTAACTTGGACATTGGTGAAGTATGTCAACTCTGAGAATTGTGGTGTTGGTGGTGCTGAAATTGACTTAGCGGTGGAGAGTTACAGCAAACTGAGTGTTGCACTCTCGGTGATGCATGAATGTTTTGAGCCCTTGCATAACCCTTTCTCTAGCAGAGATATCGTGGAAGACGTTATATTCAACCAAAGGTCTGAGCTCAATCGACTAAACTTCCAGGGTTTCTATACTGTACTTCTCGAGAGAAATGAAGAATTGATTAGTGTGGCGACTGTGAGGATATTTGGAGAGAAGATAGCAGAAGTGCCCCTCATAGGTACCAGATTTCAGTACAGGCGACTTGGAATGTGCCGCGTTTTAATGGATGAGCTCGAAAAGAAGTTAAAGCAACTAGGAGTGGAAAGACTAGTCTTGCCTGCTGTTCCCGGTGTGCTAGACACATGGACGAATTCTTTTGGTTTTGAGCAGATGACGAATTTTGAGAGGTCACAGTTTATGGACTATTCTTTCCTAGACTTTCAGGGAACTGTCATGTGTCAGAAACGGTTGACAAGACTTCCATCTCCGGAATCGGTTATAACAAGAGTATCTGAAGTGGATCAAGCAGAAGGAATTGGCAAAAGTGGAATAATGGATCTACAAGTTTGGAGACCTTCCTAA 3264 0.4164 MEVDGDKSDNGNRKRKRGLLKRKLLVNEKVELRSLEDGFLGSWHPGKIIRCGKKTRYVKYDNILDDEESNYLIEVVDVSSVLDGVNSSSALDCGYQRGLIRPLPPPIELRIKDLPFGQCVDVKYQDAWWEGVIFDRCDGMKERSIFFPDLGDEMKVGVKQLRITQDWDESTENWLQRGKWVFLELFEECERVSYVAVSVKQIWYDIRMRKDFAETIREWTCNVKELWRDLVVEVIGDYYTLTLTEVRPALNLPKNLLEEGSFQPTDNVHCEGSFEPTDIVHCDAANHCNAFDSDTGISDKPKENGDSSNLLVTDQNCGSTSIIPSVDEELEKEIILHGELESDKNRKRRRSNSIIWKPLVLSEVEFCPEVIDEYALGCRSKTVRELLKTKVRKHLAYLGWTIEWTENNSPPHRRYRYKSPDKLDPKSYTSIFQVTKILQEDPNMNSVPPQIDSSLSHLLSDPPQMSQGFDVCPPTKEPSPVKVKVEPEFCPLAIVKYYFHTLERNSADKRQWKLKAKKHLLAEGWIFDYPTERRRTTLYKSPQDQCLGTLRGACRLYLKEKIPEWTNSDHRGDDLLSSVSQLLQKEPELCTIDGSAPTAKRKHKRARTSKASAQKDLENEVLTRVLRSSKRVQKVLGSSHQKPQNILSWLIDCNIVLPKYKVFYWETEGGNSPTFEGRITREGIRCTCCQNLYGLGGFANHAGGSSNRRPSACIFLKDGRSLLDCMREVMQDHRTREITEKPHNDLFEGENDNICSVCNYGGELILCDQCPSAFHKNCLNLEGIPDGDWFCPSCRCGICGQNKVEETEDGHFLTCIQCEHKYHVECLRNGAKEDSRRYMKNWFCGEECERVYTGLQNLLGKPVLVGEDNLTWTLVKYVNSENCGVGGAEIDLAVESYSKLSVALSVMHECFEPLHNPFSSRDIVEDVIFNQRSELNRLNFQGFYTVLLERNEELISVATVRIFGEKIAEVPLIGTRFQYRRLGMCRVLMDELEKKLKQLGVERLVLPAVPGVLDTWTNSFGFEQMTNFERSQFMDYSFLDFQGTVMCQKRLTRLPSPESVITRVSEVDQAEGIGKSGIMDLQVWRPS* 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1779 1087 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 797 851 IPR013083 -
Mal8g1779 1087 Pfam PHD-finger 754 796 IPR019787 -
Mal8g1779 1087 SMART agenet_At_2 112 169 IPR014002 -
Mal8g1779 1087 SMART agenet_At_2 22 90 IPR014002 -
Mal8g1779 1087 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 890 1051 IPR000182 GO:0016407
Mal8g1779 1087 PANTHER PHD ZINC FINGER PROTEIN 1 1065 - -
Mal8g1779 1087 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 746 796 IPR013083 -
Mal8g1779 1087 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 936 1038 IPR016181 -
Mal8g1779 1087 ProSiteProfiles Zinc finger PHD-type profile. 752 797 IPR019787 -
Mal8g1779 1087 CDD NAT_SF 946 1006 - -
Mal8g1779 1087 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 1 1065 - -
Mal8g1779 1087 Gene3D - 906 1051 - -
Mal8g1779 1087 SMART PHD_3 796 848 IPR001965 -
Mal8g1779 1087 SMART PHD_3 754 795 IPR001965 -
Mal8g1779 1087 SMART ring_2 796 851 IPR001841 -
Mal8g1779 1087 SMART ring_2 755 794 IPR001841 -
Mal8g1779 1087 MobiDBLite consensus disorder prediction 594 613 - -
Mal8g1779 1087 Pfam Tify domain binding domain 677 728 IPR032308 -
Mal8g1779 1087 SUPERFAMILY FYVE/PHD zinc finger 736 795 IPR011011 -
Mal8g1779 1087 Pfam Agenet domain 28 105 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1779 Mal-Chr8 35992738 35998693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1779 24 999 PHD Transcription Factor Family AT5G58610 37.450 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal8g1779 Agenet 3.5e-17 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1779 - - gmx:102661511 1321.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1779 8 35992738 35998693 Mal8g1779 8 35992738 35998693 ECH
Mal2g3273 2 48793745 48799880 Mal8g1779 8 35992738 35998693 PCT