Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1772 ATGGAGACAATTATGTTGGGGTTGGCTTCATTCCCTCGCCACACAACACCGAACCGTTCTCGTCTAAACCTCAGACTCAGACCATCATTATCTATGCGACAGGAATATCCCCTTGCTAGCAAAATCCTTGTTAAAAATCTACCCTATTTTACTGGCGAGAATGCTTTGCAAAAGAAATTTTCAAATTTTGGCAAGATAGCTGAAGTTCAAATGGTTAAAGATGTAGTCACAGAAAGATCAAAGGGACTTGCTTTTATTCAATACACATGTCAAGACGATGCCATGCTTGCACTAGAAACAATGGATCAACAGAGTTTTTACGGCCGTACAATCTCTGTAGAACTTGCAAAACTTGGTTGGAATAGTTTTGGTGGACCTCCAAAGGCTTCAGGGCCTCCTCCAAAGAAGTGGAATTTACCAGAAGAGCAAGTAGAAGAGGTAGATTGCTGGTACTGA 456 0.4145 METIMLGLASFPRHTTPNRSRLNLRLRPSLSMRQEYPLASKILVKNLPYFTGENALQKKFSNFGKIAEVQMVKDVVTERSKGLAFIQYTCQDDAMLALETMDQQSFYGRTISVELAKLGWNSFGGPPKASGPPPKKWNLPEEQVEEVDCWY* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1772 151 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 32 147 - -
Mal8g1772 151 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 32 147 - -
Mal8g1772 151 SUPERFAMILY RNA-binding domain, RBD 28 118 IPR035979 GO:0003676
Mal8g1772 151 SMART rrm1_1 41 114 IPR000504 GO:0003723
Mal8g1772 151 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Mal8g1772 151 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 111 IPR000504 GO:0003723
Mal8g1772 151 Gene3D - 27 118 IPR012677 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1772 42 111 Eukaryotic Initiation Factors Gene Family AT1G22760 35.526 1.20e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1772 - K13195 gmx:100305971 192.2