Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1771 ATGTCTTGCTCCGTCGCGGTTTCGAATTCACCGGTTTTTTCACCTTCTTCATCTCTTTTCTGCAACAAATCTGAAACCCTAACGTTATCTCTTTCTCATCTCAAACCATCTTCAACAACAACAACAACGTCTTCTTCCTCTTCTTCGCCTTCTCCTTGTTCTTCACCTTCTTCACCCTTTTGTCTTCGATTACCGAAACTACCCTTGGTTTTTTCGTCAAACAAAGATTCTGGGTCGCAGAATGATGCTGTTTTGAAGAGGAAACGACCTACGAGGCTTAATATACCTGTTTCTGAACATGCTTTTGGTGTTCCGGCGACGCCGTCTGCGGTGGCGAGGGATGTTGTTGAGGCTGAGGGTGATGGTTATTCTGTTTATTGCAAGAGAGGGAGGAGGGAGTATATGGAAGATCGTTATACTGCTGGGGATAATCTTCGTGGTGAAAACAATTTGGCTTTTTTTGGCGTATTTGATGGGCATGGAGGTGCCAAAGCTGCTGAATTTGCTGCAAAAAACTTAGAAAAGAACATCTTGGATGAGGTGATCATGAGCGACGAAGATGATGTTGAGGAGGCAGTGAAACGCGGTTACCTCAATACCGATTCTGAGTTCATGAAAAAAGATCTCCATGGTGGTTCTTGCTGTGTAACAGCATTGATTAGGAATGGTAACTTAGTTGTGTCTAACGCCGGTGATTGCCGTGCTGTTATTAGTAGAGGAGGGGTTGCTGAGGCACTAACATCTGATCACCGACCTTCGAGGGAAGACGAAAGGGATAGAATTGAGACCCTGGGTGGTTATGTTGATTTATGTCGCGGTGTTTGGAGGATTCAAGGATCTCTTGCCGTATCAAGAGGAATCGGAGATCGACACTTGAAACAATGGGTGACAGCAGAGCCTGAGACTAAAGTTATTAGAATTGAACCTGAACATGACTTGTTAATATTAGCTTCAGATGGATTATGGGATAAGGTTAGTAATCAAGAAGCAGTAGACATTGCTCATCAATTTTGCGTAGGAAACAACAAACCACAACCATCGATGGCATGTAAAAAGCTTGCAGAGTTGTCTGTTTCAAGAGGCTCTTTGGATGATACAAGTGTTATGCTAATCAAATTGAAACACTATATTTAG 1134 0.4303 MSCSVAVSNSPVFSPSSSLFCNKSETLTLSLSHLKPSSTTTTTSSSSSSPSPCSSPSSPFCLRLPKLPLVFSSNKDSGSQNDAVLKRKRPTRLNIPVSEHAFGVPATPSAVARDVVEAEGDGYSVYCKRGRREYMEDRYTAGDNLRGENNLAFFGVFDGHGGAKAAEFAAKNLEKNILDEVIMSDEDDVEEAVKRGYLNTDSEFMKKDLHGGSCCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIETLGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVTAEPETKVIRIEPEHDLLILASDGLWDKVSNQEAVDIAHQFCVGNNKPQPSMACKKLAELSVSRGSLDDTSVMLIKLKHYI* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1771 377 Pfam Protein phosphatase 2C 123 365 IPR001932 -
Mal8g1771 377 Gene3D - 122 376 IPR036457 -
Mal8g1771 377 SUPERFAMILY PP2C-like 123 374 IPR036457 -
Mal8g1771 377 ProSitePatterns PPM-type phosphatase domain signature. 153 161 IPR000222 GO:0043169
Mal8g1771 377 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 376 - -
Mal8g1771 377 CDD PP2Cc 122 373 IPR001932 -
Mal8g1771 377 PANTHER PROTEIN PHOSPHATASE 2C 3 376 IPR015655 GO:0004722|GO:0006470
Mal8g1771 377 SMART PP2C_4 112 371 IPR001932 -
Mal8g1771 377 ProSiteProfiles PPM-type phosphatase domain profile. 122 373 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1771 Mal-Chr8 35787804 35789881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1771 1 377 PP2C-type Phosphatase Gene Family AT1G07160 63.077 2.63e-162 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1771 K17506 - gmx:100797934 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1771 8 35787804 35789881 Mal8g1771 8 35787804 35789881 ECH
Mal8g1771 8 35787804 35789881 Mal2g3267 2 48654436 48655900 ECH
Mal2g3267 2 48654436 48655900 Mal8g1771 8 35787804 35789881 PCT