Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1769 ATGACTAAGGCAAATTCATGGGTGAGAGGCAAGTGTATTGGTAAAGGAGCGTTTGGCGTTGTGAATTTAGCTTATTCAAAAAGCGATTCTAGTGTTTTCGCGGTGAAATCAGTTGATACTAAAACTTGTCTTCCAAATCAGTTAGAAGCTTTGAAGAACGAAATTCAGATTTTGAAGCAGTTATCTTCTTCTCCGCACGTGGTTTCTTATCTCGGCGATGATGTCACGTGCGAAGGAAATAAAACGTCGTCGTTTAAGAATCTACACTTGGAGTACATGCCAGGTGGCACCGTCGCTGAAATGAACCGTGCTGACATGGATGAAAAGTTAGTTAGAAACTTCGCCTGGTGTTTGGTTAACGCGCTACGTGATGTTCACGCGCGTGGTGTTGTTCATTGCGATGTTAAAGGAAGAAACGTTCTCGTCGCCGGCGGCGGTGGTAACGGTGGTTCCGTCGCTAAGCTAGCTGATTTTGGTTCTGCGGTGGAATTTTCCGGTGGAGAATGTGAAGTACCACGTGGAAGTCCGATGTGGATGGCGCCGGAGGTAATTCGCCTGGAGTATCAAGGACCGGAATCTGATGTCTGGTCATTAGGATGTACGGTGATTGAGATTTTCACCGGAAAATCGCCGTGGGAGGATGAAGGAATCGATACGCTGAGTCGAATTGGATTTTCCGATGAGTTACCGGAGTTTCCGAGCTGTTTATCGGAGCTCGGGTTAGATTTTCTGGAGAAATGTTTGAGGCGTGATCGGAATCGGAGATGGAGGTGTGATCAGCTACTTCAGCATCCATTTTTGTTACCGTGTGATCGCGTTGTTGAATCATCGCCACGTTGCGTTTTGGATTGTGAAGAAAATGAATTCGAATTGGAAGAAGAAAATGAAGTGAAGTTGAATAGTGATGATGAAATTTTAGTTAAGGATAGGATTGGTAAATTAGCTACGGGGGTGAGGGTAAATTGGGAAACGGAAGATTGGATTGAAGTGAGGGCAATTTCGTCCGAACAGAAAGAAGAAGTAACAGTGGAAAAAGAAAAAGAAGAGAGTGTGGTTGAAGAAGTTGAAACAGGGGTAATATGGGAATTTGAGAATGTGGTGAGGGTAGAAGAGGAAATTGAGGTAGGAACTAGTTTGGAATATTCTGGTTGTGATGAAAGGGTAAAACAGGAAATGTGGAAAAATAACCGCAACTGTAAGAAGAGGTCGGTTGGGAAAATAACCGCAACTGGAAATGGAAGTTGGTGTGGTTGGAGATGTCGGTATAGATACGGTTGGGAAAAGTTTAATAGGAATATTAATATTAGTGGAATATTCATCATTTGCACCTGTTGTAATAATAATTGTAAAATAATCAAATCATGTTATTTGTTCTCAATATATTATAATCCTTTTTGGTTGAAAATATTGTTGAATTGGTGTTTGAAATTGAGATTCATGTTAAAAATTATTGAGGGTGTGTTTAATTTAAAGTTTAGTAGAAATAATTTTGATAAGATTCATTTTAATAGAAGTAATTTTAAAGACGATATATTTGTATTTGAAAATAATAATATTTTATCTTTCAAAAAAAAGAAAATAATAATATTTTAA 1593 0.3917 MTKANSWVRGKCIGKGAFGVVNLAYSKSDSSVFAVKSVDTKTCLPNQLEALKNEIQILKQLSSSPHVVSYLGDDVTCEGNKTSSFKNLHLEYMPGGTVAEMNRADMDEKLVRNFAWCLVNALRDVHARGVVHCDVKGRNVLVAGGGGNGGSVAKLADFGSAVEFSGGECEVPRGSPMWMAPEVIRLEYQGPESDVWSLGCTVIEIFTGKSPWEDEGIDTLSRIGFSDELPEFPSCLSELGLDFLEKCLRRDRNRRWRCDQLLQHPFLLPCDRVVESSPRCVLDCEENEFELEEENEVKLNSDDEILVKDRIGKLATGVRVNWETEDWIEVRAISSEQKEEVTVEKEKEESVVEEVETGVIWEFENVVRVEEEIEVGTSLEYSGCDERVKQEMWKNNRNCKKRSVGKITATGNGSWCGWRCRYRYGWEKFNRNINISGIFIICTCCNNNCKIIKSCYLFSIYYNPFWLKILLNWCLKLRFMLKIIEGVFNLKFSRNNFDKIHFNRSNFKDDIFVFENNNILSFKKKKIIIF* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1769 530 SMART serkin_6 7 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1769 530 Pfam Protein kinase domain 9 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1769 530 CDD STKc_MAPKKK 6 267 - -
Mal8g1769 530 ProSitePatterns Protein kinases ATP-binding region signature. 13 36 IPR017441 GO:0005524
Mal8g1769 530 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 4 362 - -
Mal8g1769 530 SUPERFAMILY Protein kinase-like (PK-like) 5 277 IPR011009 -
Mal8g1769 530 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 362 - -
Mal8g1769 530 ProSiteProfiles Protein kinase domain profile. 7 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1769 530 Gene3D Transferase(Phosphotransferase) domain 1 3 351 - -
Mal8g1769 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1769 Mal-Chr8 35765383 35766975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1769 7 348 MAP Kinase Kinase Kinase AT2G30040 57.759 1.43e-125 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mal8g1769 Pkinase 1.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1769 - - mtr:MTR_5g071560 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1769 8 35765383 35766975 Mal8g1769 8 35765383 35766975 ECH