Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1766 ATGGCCGAAGCCTTACTTGGTGTTGCGTTTGAGAATTTGGTATCTCTCATTCAAAATGAATTTTCCACCATTTCTGGAATCAAGTCAAAGGCTCTAAAGCTTTCAACCACCTTGGATCTCATCAAGGCCGTTCTTGAAGATGCTGAGCAGAAACAAATAACAGACCGTTCTATTAAGGTATGGCTTCAACAACTCAAAGATGCAGTCTACGTGCTCGATGATATTCTCGATGAATGTTCCATTCAATCTAGTCAATTTAAGGGCTCATTCTCTTTCACATTAAAGAATATCATATTTCGTCATAACATTGGTACCAGGTTCAAAGAAATTACAAAGAGATTCGATGATATTGCTGAAAGTAAGAACAAGTTTCTTCTTCAAGAGCGTGTTATTGTTAGGGAAAGGTCGATTGAAGTGGCTGAATGGCGTCAAACCAGCTCAGTTATTGCTGAACCGAAAGTTTTTGGACGAGAAGATGATAAAGAGAAGATTGTTGAGTTTCTTCTCACCCAAGCAAAGGGCTCTGACCTCCTTTCCATCTATCCAATTGTTGGCTTAGGTGGTATTGGAAAAACAACTCTTGCTCAATTGGTCTACAATGATGTTAGGGTGAGTGACAATTTTGATACAAAGATTTGGGTTTGTGTTTCTGATGCTTTCTCTGTTAATAAAATTTTGTGTTCTATTATAGAATCATTCAAAAGAGAAAAGTGTGATGCCTTAGATTTAGATGTAATACAAGCAGAAGTGCAAGAATTGTTGCAAGGTAAAAGATATTTGCTTGTTTTGGATGATGTGTGGAATAGAAATCAAGAACTGGAATTTGGATTAAGCCAAGAGAAATGGAAAAAGTTGAAATCTGTGTTGTTGTGTGGATCCAAAGGTTCGTCAATTTTAGTTTCCACCCGTGATAGGGATGTTGCGGAAATCATGGGAACATGCCAAGCTCATCATTTGTCCGGTCTCTCTGAACACGAATGTTGGTTGTTATTCAAACAATATGCATTTGGTCATGATAGAGAACAGAAGACTGAGTTTGTGACAGTAGGAAAAGAGATAGTAAAGAAGTGCGGGGGATTGCCTCTTGCAGCACAAGCATTGGGAGGTCTAATGCGCTCAAGGATTGGAGAAAAAGAATGGCTTGAAATTAAACATAGCAGGCTTTGGTCTTTACCGAATGAGAATTCTATTATGCCTGCATTAAGGTTGAGCTACTTTCATCTAACACCGACCTTAAAACAATGTTTCACTTTTTGTGCCATGTTTCCCAAAGATACAGAAATCTTGAAGGATGATTTAATTCATCTTTGGATCGCCAATGGATTTATATCGTCGAGGGAAAATTTGGAGATAGAAGATGTTGGCAATATGATTTGGAATGAATTGTGCCAAAAGTCATTTTTCCAAGATATAAAGATGGTCAATGATTCAGGAGACATTTCTTTCAAGTTGCATGATCTTGTCCATGATCTTGCTCAATCAATTATAGGAACAGAGTGTTTGATTTTGGAGAATACAAACATTACTGATTTGTCAACAAGCACTCACCATATTGGTTTAGTATCTGCAACACCGTCATTGTTCGACAAGGGTGCTTTCACAAGAGTTGAATCGCTGCGAACATTGTTTCAGATAGGTTTTTACAACACAAGGTTTTCTGATTGCTTCCCAACTTCAGTACGGGTTTTACGTACAAACTCATTTGATTTATCATCGCTAAGGAGTTTAATTCATTTGAGGTACTTGGAGCTGTTTGATTTCCATGACATAAAAACCCTACCTGACTCAATTTATAGCTTGCGTAATTTGGAAATCTTGAAACTGGAACATTTTTCTAAACTACGTTGTCTACCGGAAAACTTGAATTGCTTACAAAAGCTCAGACATCTTGTTATTGAAAATTGTGATGCATTGTCTCGTGTGTTCCCTAACATTGGAAAATTATCTTCCCTAAGAACATTAAGTAAACACATTGTCCGTTTAGAGATTGGATACAGCTTGGCAGAATTACATGATCTACAGCTAGGAGGAAAACTAAGTATTACATGCCTAGAAAATGTTGGAAGTTTGTCTGAAGCTCGAGAAGCCAATTTGATAGATAAAAAAGAACTTCAGGAAATATGTATGTCATGGAACAACAGGCGTAAAACCAAGTCACCTGCTACTAGCACCGAGGAAGTACTTGAAGTGCTTGAACCACACTCAAATCTTAAGATCTTGAAAATACATGGATATGACGGATTGTACCTCCCAAATTGGATCCAAATAAAAAGTAGTTTAGTTGTTCTTAGACTTTCTTATTGCAAAAACTGTGTGCGGCTTCCATCACTTGGTAAATTACCATCTCTCAAAAAACTCCAATTATGGTATATGGATAATGTGCAGTATGTGGATGATGAAGAATCAAGCGATGGTGTGGAGGTTAGGGGTTTCCCATCTCTGGAGGAGCTACTTTTAGGTAATTTGCCTAACTTGGAACGGTTGTTGAAAGTGGAAACAGGGGAGGTTTTTCCCCGCCTTTCTAAGTTGGCCATCGTTGGTTGCCCTAAACTTGGGTTGCCATGCCTTTCATCTTTAAAAGAACTCATTGTAGATGGATGTAACTATGAGTTACTGGGGTCAATCTCTAGTTTCTATGGCCTAACTATCCTTGAGATTAATAGAGGTGAAGATGTGACATCCTTTCCAAAAGGGATGTTGAGAAACCTGACTTATCTTCGAACTTTGGAAATATCTGATTTCCCAAAATTGAAGGCATTATCAAACGAACCCTTCAACCTAGCTTTGGAGCATCTTGGTATCCATCACTGTCGTGAGCTTGAGTCTTTACCAGAGGAAATATGGGAAGGTCTACGATCCCTTCGAACCATGGAGATTGCTTTCTGTGAAGGACTGAGATGCTTGCCGGAAGGTATTCGGCACCTCACTTCACTTGAGGTTCTGACAATCTATGGTTGCCCAGCTGTAGCGGAGCGATGTAAGGAGGGAATAGGAGAGGATTGGGACAAGGTAGAACACATTCCAAAACTATCTATTAGTTAG 3042 0.3876 MAEALLGVAFENLVSLIQNEFSTISGIKSKALKLSTTLDLIKAVLEDAEQKQITDRSIKVWLQQLKDAVYVLDDILDECSIQSSQFKGSFSFTLKNIIFRHNIGTRFKEITKRFDDIAESKNKFLLQERVIVRERSIEVAEWRQTSSVIAEPKVFGREDDKEKIVEFLLTQAKGSDLLSIYPIVGLGGIGKTTLAQLVYNDVRVSDNFDTKIWVCVSDAFSVNKILCSIIESFKREKCDALDLDVIQAEVQELLQGKRYLLVLDDVWNRNQELEFGLSQEKWKKLKSVLLCGSKGSSILVSTRDRDVAEIMGTCQAHHLSGLSEHECWLLFKQYAFGHDREQKTEFVTVGKEIVKKCGGLPLAAQALGGLMRSRIGEKEWLEIKHSRLWSLPNENSIMPALRLSYFHLTPTLKQCFTFCAMFPKDTEILKDDLIHLWIANGFISSRENLEIEDVGNMIWNELCQKSFFQDIKMVNDSGDISFKLHDLVHDLAQSIIGTECLILENTNITDLSTSTHHIGLVSATPSLFDKGAFTRVESLRTLFQIGFYNTRFSDCFPTSVRVLRTNSFDLSSLRSLIHLRYLELFDFHDIKTLPDSIYSLRNLEILKLEHFSKLRCLPENLNCLQKLRHLVIENCDALSRVFPNIGKLSSLRTLSKHIVRLEIGYSLAELHDLQLGGKLSITCLENVGSLSEAREANLIDKKELQEICMSWNNRRKTKSPATSTEEVLEVLEPHSNLKILKIHGYDGLYLPNWIQIKSSLVVLRLSYCKNCVRLPSLGKLPSLKKLQLWYMDNVQYVDDEESSDGVEVRGFPSLEELLLGNLPNLERLLKVETGEVFPRLSKLAIVGCPKLGLPCLSSLKELIVDGCNYELLGSISSFYGLTILEINRGEDVTSFPKGMLRNLTYLRTLEISDFPKLKALSNEPFNLALEHLGIHHCRELESLPEEIWEGLRSLRTMEIAFCEGLRCLPEGIRHLTSLEVLTIYGCPAVAERCKEGIGEDWDKVEHIPKLSIS* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1766 1013 Gene3D - 6 118 - -
Mal8g1766 1013 PRINTS Disease resistance protein signature 598 614 - -
Mal8g1766 1013 PRINTS Disease resistance protein signature 180 195 - -
Mal8g1766 1013 PRINTS Disease resistance protein signature 357 371 - -
Mal8g1766 1013 PRINTS Disease resistance protein signature 253 267 - -
Mal8g1766 1013 CDD RX-CC_like 2 119 IPR038005 -
Mal8g1766 1013 Gene3D - 411 494 IPR036388 -
Mal8g1766 1013 Pfam NB-ARC domain 157 385 IPR002182 GO:0043531
Mal8g1766 1013 SUPERFAMILY RNI-like 809 986 - -
Mal8g1766 1013 PANTHER OS05G0414200 PROTEIN 23 943 - -
Mal8g1766 1013 Gene3D Ribonuclease Inhibitor 501 656 IPR032675 -
Mal8g1766 1013 SUPERFAMILY L domain-like 483 851 - -
Mal8g1766 1013 PANTHER DISEASE RESISTANCE PROTEIN RP 23 943 IPR044974 GO:0006952
Mal8g1766 1013 Gene3D - 136 316 IPR027417 -
Mal8g1766 1013 Gene3D - 321 409 IPR042197 -
Mal8g1766 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 419 IPR027417 -
Mal8g1766 1013 Gene3D Ribonuclease Inhibitor 657 853 IPR032675 -
Mal8g1766 1013 Gene3D Ribonuclease Inhibitor 854 998 IPR032675 -
Mal8g1766 1013 Pfam Rx N-terminal domain 6 92 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1766 Mal-Chr8 35714405 35717446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1766 183 867 WRKY Transcription Factor Family AT5G45050 23.315 5.27e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1766 - - mtr:MTR_5g071220 1333.16