Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1752 ATGCTAAACCAACCCAACTCAGAAAACTCATCCACCAACATATTTAGTCAACTAGCTCAAAACATGTCCTCCGACAACTACATCATGCTTGCAGCCATTGTTTCTCTCCTCCTAGTAATCCTCTTTGTCCTCCTTCTCCACATCTATGCCAAATGGTTCCTAGCTCAGTCCAACTCACAGTCCAATCCTCGCCGTCCGGTGAACCTCTTCGACGTTCCAATATCTTCCAACTTCCACCACCATTTCAATATCCAATCCTCACCCTTTAAAGGACTCAACTCAACAATAGTTTCGACGATTCCCACGTTTGTGTCGGAAGAAAAAACAGAAGAACTAGAATGTGTGATTTGTTTGAGTTATATTGAAGAAGGAGAGATTGGAAGAAAGTTACCAAAATGTGGGCATGCTTTTCATGTTGAATGTATTGATATGTGGTTGAATTCACATTGCAATTGTCCAATTTGTAGAGCTTTGATTGTTGAGGAAGATTCTCATGATGGTGATGTTGTTGAGATTGTGATTGATACTACTCCAAGTTATGGGATTAGTGAGAGTGGTTCTGTTTCTGTATCAGAAACTTCTTCTTTGTCTTTGTTTGGTTTCTCTTTCAAGAGAATTCTTAGTAAAGTTTTTCTTTCTTCTCATGTAAATGAATTAGATGATAGTTCACTATGA 675 0.3867 MLNQPNSENSSTNIFSQLAQNMSSDNYIMLAAIVSLLLVILFVLLLHIYAKWFLAQSNSQSNPRRPVNLFDVPISSNFHHHFNIQSSPFKGLNSTIVSTIPTFVSEEKTEELECVICLSYIEEGEIGRKLPKCGHAFHVECIDMWLNSHCNCPICRALIVEEDSHDGDVVEIVIDTTPSYGISESGSVSVSETSSLSLFGFSFKRILSKVFLSSHVNELDDSSL* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1752 224 PANTHER - 7 216 - -
Mal8g1752 224 SUPERFAMILY RING/U-box 103 162 - -
Mal8g1752 224 CDD RING-H2_EL5_like 113 156 - -
Mal8g1752 224 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Mal8g1752 224 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 160 IPR013083 -
Mal8g1752 224 Pfam Ring finger domain 113 156 IPR001841 -
Mal8g1752 224 SMART ring_2 114 155 IPR001841 -
Mal8g1752 224 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 216 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1752 Mal-Chr8 35329096 35329770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1752 25 217 C3H Transcription Factor Family AT2G42360 32.227 1.51e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1752 - - mtr:MTR_5g071930 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1752 8 35329096 35329770 Mal8g1752 8 35329096 35329770 ECH
Mal2g3260 2 48541774 48542562 Mal8g1752 8 35329096 35329770 PCT