Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1718 ATGGCCACAGAAGCAAGAACAAAATTCCAAAACCCAGATTACCGACCCGATTTCATCTCAGAAAAAAACTTAACAGCGCCGTCAACTCACGACGGTCTTCACTACTGGCAATTCATGATTTCCGGATCCATCGCTGGTTGCATCGAACACATGGCAATGTTTCCCGTTGACACCGTTAAAACTCACATGCAAGCCATAACATCTTGTCCTATTAAATCCGTTTCCGTCCGTCAAGCTTTGAAATCAATCCTCCAATCCGAAGGCCCATCCGCCTTATACCGTGGTATTGGCGCAATGGGCCTTGGCGCGGGCCCCGCCCACGCTGTTTATTTTTCAGTTTATGAAGCCTGTAAAAAGAAATTCTCACATGAAAATTATAATAATCATTTTGTTCATGCTGGTTCGGGGGTTTGTGCGACGGTGGCGAGTGATGCGGTGTTTACGCCGATGGATATGGTGAAACAGAGGTTGCAGTTGAGTAATAGTGGTTATAAAGGGGTATTTGATTGTGTGAAGAGGGTTTTTAGTGAGGAAGGGTTTGGTGCTTTTTATGCTAGTTATAGGACTACTGTTTTGATGAATGCGCCTTTTACTGCTGTGCATTTCGCGACTTATGAGGCTGCGAAAAGAGGGTTGAATGAGGTTTCGCCTGAGAGTGTTGATGATGAGAGGTTGATTGTTCATGCTACAGCCGGGGCGGCTGCTGGTGGGTTGGCTGCTGCTGTTACTACGCCGCTTGATGTTGTTAAAACTCAATTGCAATGTCAGGGTGTGTGTGGATGCGATAGGTTCAAAAATGGTTCAATTGGCGATGTTATTAAAACAATAGTTAAAAAGGATGGATACAAAGGGCTCATGCGAGGATGGGTTCCAAGGATGCTCTTTCATGCTCCTGCAGCCGCTATTTGTTGGTCTACATATGAAGCTGGAAAGTCCTTTTTCCAAGATTACAACGAGCAGAAAGACGCTGGGACTGTCACCTAA 984 0.4543 MATEARTKFQNPDYRPDFISEKNLTAPSTHDGLHYWQFMISGSIAGCIEHMAMFPVDTVKTHMQAITSCPIKSVSVRQALKSILQSEGPSALYRGIGAMGLGAGPAHAVYFSVYEACKKKFSHENYNNHFVHAGSGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVFDCVKRVFSEEGFGAFYASYRTTVLMNAPFTAVHFATYEAAKRGLNEVSPESVDDERLIVHATAGAAAGGLAAAVTTPLDVVKTQLQCQGVCGCDRFKNGSIGDVIKTIVKKDGYKGLMRGWVPRMLFHAPAAAICWSTYEAGKSFFQDYNEQKDAGTVT* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1718 327 SUPERFAMILY Mitochondrial carrier 31 308 IPR023395 -
Mal8g1718 327 Gene3D Mitochondrial carrier domain 164 327 IPR023395 -
Mal8g1718 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 120 IPR018108 -
Mal8g1718 327 PANTHER MITOFERRIN-1-RELATED 1 322 - -
Mal8g1718 327 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 1 322 - -
Mal8g1718 327 Gene3D Mitochondrial carrier domain 16 163 IPR023395 -
Mal8g1718 327 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085
Mal8g1718 327 PRINTS Mitochondrial carrier protein signature 232 254 IPR002067 GO:0055085
Mal8g1718 327 PRINTS Mitochondrial carrier protein signature 51 65 IPR002067 GO:0055085
Mal8g1718 327 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Mal8g1718 327 PRINTS Mitochondrial carrier protein signature 142 160 IPR002067 GO:0055085
Mal8g1718 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 211 IPR018108 -
Mal8g1718 327 Pfam Mitochondrial carrier protein 224 317 IPR018108 -
Mal8g1718 327 Pfam Mitochondrial carrier protein 33 124 IPR018108 -
Mal8g1718 327 Pfam Mitochondrial carrier protein 130 214 IPR018108 -
Mal8g1718 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 223 313 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1718 Mal-Chr8 34129224 34135374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1718 118 321 Chloroplast and Mitochondria Gene Families AT1G07030 27.404 9.75e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1718 K15113 - gmx:100802640 569.311