Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1637 ATGACAGATTCTGAAACAAACGCAGCAACACCGGCGTCACTTTACGTCGGCTACCTTCACTCCAACATAACCAACGATCAGCTGTATAAGGCATTTTCTGAATTCAAAACCCTCACTTCTGTTCGCGTATGTAGAGAGTCATCCACCGGGAAGTCACTCTGTTACGGTTACGTCAACCTCTCCTCTGATAAAAAAGTTTTCCTGCAGGCACTTGATTTGATTGGGCCAGTTTATGAAGTAATGGATTCTTTTTTAGGAGTTAGAGAGAAAACTGGTGTTCTTTTTGCTTACGGACTTTTATTGATGAAGCAACAAGATCTACAAGAAGCAAGGATACATAGATCCTATGAAAATGAAAATCCTGGGCCTGGGATGAAGTTTAGCTCCGAAGATCAAGTTACCGATTCATTTCATCCACGTCTTCCTTTTTGCAGGAACACCATGTGTGAATAA 453 0.415 MTDSETNAATPASLYVGYLHSNITNDQLYKAFSEFKTLTSVRVCRESSTGKSLCYGYVNLSSDKKVFLQALDLIGPVYEVMDSFLGVREKTGVLFAYGLLLMKQQDLQEARIHRSYENENPGPGMKFSSEDQVTDSFHPRLPFCRNTMCE* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1637 150 PANTHER RNA BINDING PROTEIN 5 65 - -
Mal8g1637 150 Gene3D - 1 83 IPR012677 -
Mal8g1637 150 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 60 IPR000504 GO:0003723
Mal8g1637 150 SMART rrm1_1 13 88 IPR000504 GO:0003723
Mal8g1637 150 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 66 IPR000504 GO:0003723
Mal8g1637 150 SUPERFAMILY RNA-binding domain, RBD 8 62 IPR035979 GO:0003676
Mal8g1637 150 PANTHER POLYADENYLATE-BINDING PROTEIN 5 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1637 Mal-Chr8 32113080 32114768 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1637 12 62 Eukaryotic Initiation Factors Gene Family AT2G36660 62.745 2.29e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1637 - - zju:107432034 88.5817