Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1636 ATGGAATACAGAAGGTTTGATAATAGTCAAGAAATTGAGGCTGAAAATGTTGAAGGAAGTCATGAAGTGGTAAACAATGGTGACATGGAAGAAGATGAGGATGGATTTGACTATGGTGGCATGGATTATGGAATTGATAATGAAGGGGCAGAATATGGTGACAATGAAGAAGATGATGGAATTGGAATTGATGATGAGGTTGAAATTGATGATGAGGATGAAGTATATCAAAATGGTGACATGGAAGAAGAGGATATTAATGATGAGGAAGAAGAGGATATTAATGATGAGGATGAAGTAGTTCAAAATGGTGACACGGAAGAAGGGGATGGAAATGAGGCTCAAGGAGTTCAAAATGATGACATGGAAGAAGATGGAAGTGGTTATGAAGGCCAATATGTCCTAGTTAATAGTGTTGAGGACATTGCGGCATTGGACCTGAGTGGTTTAGGGCCTTTATGTGCAAGGAAATTTGAATTTGGAGGCATGGAAATTGCTTATCAGTTCTATATGTCGTATGGAAGAGCGAATGGATTTTCAGTCCGGAAAGGCAAGTTAATTTACTGCAAAACGGGAGAAGTAGTGCAACGCACATTTGTTTGCCATAGACAAGGATATAGGGAAGTCAGAGCACTAACTGAGGAGAATAGAAAACGTCCGGTAAAACGTGAGACTCGATGTGGATGTAAAGCTTTGTTTCGGGTACACATAGATGTTTTCACAAAACGGTGGCGAGTTACAGTTTTTACAAATGAGCACAACCATGAGCTAGTTTCTCAGGAACATTGTGGATTGCTACCTAAACACTGTGCAATGACAGATTCAGACGTGATGCAAATGAACGCTATGGTAAAAAGTGGCATTTTACCTTCTCGCATATATTCTTCATTTGCACATCAATCAGGAGGGTATGAGAAAATTGGTTTCCGTCGGAAAGACCTGTATAATCAATTAGCGAGACAACGACGTTTGCAACAGTCTGATGCAAAATCTGCACTAAATTATCTTTGTGGCTTGCGTTTGAATGATCCCATGATATTTTTTAAGCACACTACTGATTCCACAGGTAGGCTAGAACACCTGTTTTGGTGTGACGGAAAGAGTCGTCTTGATTACCAAGTTTATGGCGACGTTGTTGCATTTGATGCAACATATGGTAAGAACAAATACTATTGCCCTTTAGTTGTGTTTGCTGGTGTGAATAATCATAACTCTACTATAATTTTTGGTGGAGCTATTGTTGCTGATGAAAAAGAAGAAACCTATGTCTGGGTGCTTTCACGGTTTTTGGAAGCAATGTCTGGAAAATCGCCATCTGCTGTAATCACTGATGGTGATTTAGCAATGAAAAATGCAATAAAACGAGTTTTTCCAGATGCTCATCATAGACTGTGTGCGTGGCACTTGCTTCGGAATGCAACCTCCAACATAGGTGATCCTGCATTTGTGGGTGAATTTAGAAAATGTATGTTAGGTGATTATGAGGTTGGAGAATTTTCCAGGAAGTGGGCTGAAACTGTTGATAAATTTGGGTTGCATGACAACAATTGGATCAAAGAAACATATGAGAAGAGAAAGTCATGGGCAACAGCACATACTCGTGGCCACTTCTTTGCAGGATTCAGAACTACATCTCGATGTGAGGGGCTGCATGCAGAGTTAGGGAAGTTTGTTCACTCCCGTTACAACTTGTCAGATTTTTTGCTCCACTATCACCGTTGCCTAAATTTCATGCGGTTTAAAGAGGTACAAGAAGACTTTGATACTGAATATGGTGACCCAGTTCTCATTACCAAATTCACTAAACTTGAGCTATCTGGCGCGAAGGTATTTACGAAAGAAATCTTTTGTAAATACCAGACTTTCATCAACCGATCTGCTTCCATGGTTGTAACTGCAACGAAAGAAATATGTGGGCACTACATCTATACGATTAGGAGGTACAGTTTGCCAGAACGGGATTGGCGTGTATCATTTAACCCTTCGGGAGATATTTTCAAGTGTTCTTGTCAGAGGATGGAGTCTTTTGGAATTCCGTGTGAGCATATCATTAAAGTTTTGGTTTTTAGTAATTATACTGAGTTGCCTCAATGCCTTGTGATGAGTAGATGGACAAAAAATGCAAAGGATATATTAGGTAGAAGTTCAAATGGTCGTCCGAGATATTGGGACTCGCACCTTGCAACCTGA 2190 0.4 MEYRRFDNSQEIEAENVEGSHEVVNNGDMEEDEDGFDYGGMDYGIDNEGAEYGDNEEDDGIGIDDEVEIDDEDEVYQNGDMEEEDINDEEEEDINDEDEVVQNGDTEEGDGNEAQGVQNDDMEEDGSGYEGQYVLVNSVEDIAALDLSGLGPLCARKFEFGGMEIAYQFYMSYGRANGFSVRKGKLIYCKTGEVVQRTFVCHRQGYREVRALTEENRKRPVKRETRCGCKALFRVHIDVFTKRWRVTVFTNEHNHELVSQEHCGLLPKHCAMTDSDVMQMNAMVKSGILPSRIYSSFAHQSGGYEKIGFRRKDLYNQLARQRRLQQSDAKSALNYLCGLRLNDPMIFFKHTTDSTGRLEHLFWCDGKSRLDYQVYGDVVAFDATYGKNKYYCPLVVFAGVNNHNSTIIFGGAIVADEKEETYVWVLSRFLEAMSGKSPSAVITDGDLAMKNAIKRVFPDAHHRLCAWHLLRNATSNIGDPAFVGEFRKCMLGDYEVGEFSRKWAETVDKFGLHDNNWIKETYEKRKSWATAHTRGHFFAGFRTTSRCEGLHAELGKFVHSRYNLSDFLLHYHRCLNFMRFKEVQEDFDTEYGDPVLITKFTKLELSGAKVFTKEIFCKYQTFINRSASMVVTATKEICGHYIYTIRRYSLPERDWRVSFNPSGDIFKCSCQRMESFGIPCEHIIKVLVFSNYTELPQCLVMSRWTKNAKDILGRSSNGRPRYWDSHLAT* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1636 729 Pfam FAR1 DNA-binding domain 168 258 IPR004330 -
Mal8g1636 729 MobiDBLite consensus disorder prediction 49 106 - -
Mal8g1636 729 Pfam MULE transposase domain 378 472 IPR018289 -
Mal8g1636 729 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 133 710 IPR031052 GO:0006355
Mal8g1636 729 MobiDBLite consensus disorder prediction 1 128 - -
Mal8g1636 729 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 133 710 - -
Mal8g1636 729 Pfam SWIM zinc finger 668 687 IPR007527 GO:0008270
Mal8g1636 729 ProSiteProfiles Zinc finger SWIM-type profile. 655 691 IPR007527 GO:0008270
Mal8g1636 729 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1636 Mal-Chr8 32088486 32090675 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal8g1636 MULE 2.1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1636 - - ccaj:109791994 647.121