Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1578 ATGTCGGAGATAGAACAAGCGGCGGCGGAAGCCTCCACCACCACCATCCTCTTCAAAAAATACGAGCTCGGAAAACTCCTAGGATGCGGCGCGTTCGCGAAAGTATATCACGCGCGGAACACAGAAAACGGACAAAGCGTTGCTGTGAAAGTGATCAACAAGAAGAAAATCAACGCTATAGGACTCGCTGGAAACGTGAAACGTGAAATTTCAATTATGAGTCGGCTTCGTCATCCGAATATTGTTCGGCTTCATGAAGTTCTTGCTTCGAAAACTAAGATCTATTTTGTTATGGAGTTTGCTAAAGGTGGTGAATTGTTCGCGAAGATTGCGAATAAAGGACGGTTTAGTGAAGATCTGTCGAGGAGATTGTTTCAACAGCTTATTTCTGCTGTTGGATATTGTCATGCTCATGGTGTTTTTCATCGTGATTTGAAACCGGAAAATCTGTTGCTGGATGATAAGGGGAATTTGAAGGTTTCAGATTTTGGATTGAGTGCTGTGAAAGAGCAAGTTCGGATTGACGGGATGTTACACACACTTTGTGGAACACCTGCTTACGTGGCACCGGAGATTTTAGCGAAGAAAGGTTATGATGGAGCTAAAGTTGATATTTGGTCGTGTGGTATTATTCTCTTTGTTCTTGTTGCTGGTTATCTTCCATTTAACGATCCAAATCTGATGGTGATGTATAGGAAGATTTATAGCGGCGAATTTAAGTGTCCACGATGGGTTTCACCGGATCTAAAGCGGTTTTTATCGCGGTTGCTGGATACGAATCCGGAGACGAGGATAACTGTTGATGAGATTTTGAGGGACCCTTGGTTTAGAAAAGGGTATAAAGAGGTGAAGTTTTATGAAGAGGGTTTTGATTTTGAGAAGAAGGTTAACGGGGAAGCAGAGGGAAAGCCTTTGGATTTCAATGCATTTGATATTATATCGTTTTTCTCTAGAGGGTTGAATCTTTCAGGGTTTTTTATTGATGGTGGTGAAGGGGAGAGGTTTATGTTGAGGGAGTTGCCGGAGAAGGTTGTTGAGAAGGCGGAGGCGGCGGCTAAAGCAGAGGGGCTTGTGGTGAGGAGGAAGAAGGAGTGTGGGGTGGAGATTGAAGAGCAGAATGGGGATTTGGTGATTGGGGTTGAGATTTACCGGTTAACGGCTGAGATGGTTGTGGTTGAGGTGAAGAGGTTTGGTGGGGACTCGGTTGCTTTCGAGGAAGTCTGGAAGAATAAGTTGAGGCCACACTTGTGTGATGCATCAACGTCGCATCAGGACCAAACTCAGTCTCACGCTGTCCCTGCTAGTGCTGACTGA 1314 0.4482 MSEIEQAAAEASTTTILFKKYELGKLLGCGAFAKVYHARNTENGQSVAVKVINKKKINAIGLAGNVKREISIMSRLRHPNIVRLHEVLASKTKIYFVMEFAKGGELFAKIANKGRFSEDLSRRLFQQLISAVGYCHAHGVFHRDLKPENLLLDDKGNLKVSDFGLSAVKEQVRIDGMLHTLCGTPAYVAPEILAKKGYDGAKVDIWSCGIILFVLVAGYLPFNDPNLMVMYRKIYSGEFKCPRWVSPDLKRFLSRLLDTNPETRITVDEILRDPWFRKGYKEVKFYEEGFDFEKKVNGEAEGKPLDFNAFDIISFFSRGLNLSGFFIDGGEGERFMLRELPEKVVEKAEAAAKAEGLVVRRKKECGVEIEEQNGDLVIGVEIYRLTAEMVVVEVKRFGGDSVAFEEVWKNKLRPHLCDASTSHQDQTQSHAVPASAD* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1578 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Mal8g1578 437 SUPERFAMILY Protein kinase-like (PK-like) 17 286 IPR011009 -
Mal8g1578 437 Pfam Protein kinase domain 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1578 437 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 426 - -
Mal8g1578 437 SMART serkin_6 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1578 437 ProSiteProfiles Protein kinase domain profile. 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1578 437 Gene3D Kinase associated domain 1, KA1 305 420 - -
Mal8g1578 437 CDD CIPK_C 308 417 - -
Mal8g1578 437 PANTHER - 1 426 - -
Mal8g1578 437 Gene3D Transferase(Phosphotransferase) domain 1 11 303 - -
Mal8g1578 437 Pfam NAF domain 306 360 IPR004041 GO:0007165
Mal8g1578 437 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Mal8g1578 437 ProSiteProfiles NAF domain profile. 302 327 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1578 Mal-Chr8 30778168 30780225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1578 1 422 CBL-interacting serine-threonine protein kinases AT2G30360 63.048 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mal8g1578 Pkinase 1.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1578 - K12761 gmx:100813555 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1578 8 30778168 30780225 Mal8g1578 8 30778168 30780225 ECH
Mal2g2952 2 40368661 40370040 Mal8g1578 8 30778168 30780225 PCT