Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1569 ATGGCATCTTCTACTTTGATAGTTATTATGTTCTTTCTCTTCATTGAAATGCATTTTCATGGTGTCATTGCTAACTATGGTGGTTGGCAGAGTGGTCATGCCACTTTCTATGGTGGTGGTGATGCTGCTGCCACAATGGGAGGTGCATGTGGTTATGGAAATTTGTACAATCAAGGATATGGAACAAACACTGCAGCACTAAGCACAGCTTTGTTCAATAAAGGCTTGAGCTGTGGAGCATGTTATGAAATGAGGTGTGTTGGTGACTCAAGATGGTGCAAGCATAGCACCATTGTTGTTACTGCCACAAACTTTTGTCCACCAAATTTTGCTTTGCCAAACAATAATGGTGGTTGGTGTAATCCTCCTCTGCAACACTTTGATATGGCACAACCAGCTTTCCTTCAAATTGCTCAATATAAAGCTGGAATTGTGCCTGTATCATTTAGAAGAGTGTCATGTATAAAAAAGGGAGGAATAAGGTTCACAATCAATGGCCACTCATACTTCAACTTGGTTTTGATCACCAACGTCGCGGGTGCAGGAGATGCCCATGCAGTCTCAATCAAAGGGTCCAAAACTAGCTGGCAAGCCATGTCAAGAAATTGGGGCCAAAATTGGCAGAGCAATTCCTATCTCAATGGACAAAGCCTCTCTTTTAAAGTCACCACTGGTGACGGTAGAACTGTGACAAGCTACAACGTGGCACCAGCTAATTGGCAATTTGGTCAGACTTTTCGAGGGGGTCAGTTTTAG 756 0.4299 MASSTLIVIMFFLFIEMHFHGVIANYGGWQSGHATFYGGGDAAATMGGACGYGNLYNQGYGTNTAALSTALFNKGLSCGACYEMRCVGDSRWCKHSTIVVTATNFCPPNFALPNNNGGWCNPPLQHFDMAQPAFLQIAQYKAGIVPVSFRRVSCIKKGGIRFTINGHSYFNLVLITNVAGAGDAHAVSIKGSKTSWQAMSRNWGQNWQSNSYLNGQSLSFKVTTGDGRTVTSYNVAPANWQFGQTFRGGQF* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1569 251 SUPERFAMILY Barwin-like endoglucanases 28 177 IPR036908 -
Mal8g1569 251 PANTHER EXPANSIN-A15 7 251 IPR002963 GO:0009664
Mal8g1569 251 PANTHER EXPANSIN 7 251 - -
Mal8g1569 251 PRINTS Expansin signature 234 250 IPR002963 GO:0009664
Mal8g1569 251 PRINTS Expansin signature 59 73 IPR002963 GO:0009664
Mal8g1569 251 PRINTS Expansin signature 205 226 IPR002963 GO:0009664
Mal8g1569 251 PRINTS Expansin signature 98 108 IPR002963 GO:0009664
Mal8g1569 251 PRINTS Expansin signature 86 97 IPR002963 GO:0009664
Mal8g1569 251 PRINTS Expansin signature 170 191 IPR002963 GO:0009664
Mal8g1569 251 PRINTS Expansin signature 117 134 IPR002963 GO:0009664
Mal8g1569 251 PRINTS Expansin signature 134 147 IPR002963 GO:0009664
Mal8g1569 251 PRINTS Expansin signature 158 170 IPR002963 GO:0009664
Mal8g1569 251 Gene3D - 159 251 IPR036749 -
Mal8g1569 251 SUPERFAMILY PHL pollen allergen 156 248 IPR036749 -
Mal8g1569 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 169 248 IPR007117 -
Mal8g1569 251 SMART dpbb_1 64 149 IPR007112 -
Mal8g1569 251 Pfam Lytic transglycolase 64 149 IPR009009 -
Mal8g1569 251 PRINTS Expansin/Lol pI family signature 46 64 IPR007118 GO:0005576
Mal8g1569 251 PRINTS Expansin/Lol pI family signature 142 158 IPR007118 GO:0005576
Mal8g1569 251 PRINTS Expansin/Lol pI family signature 196 210 IPR007118 GO:0005576
Mal8g1569 251 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Mal8g1569 251 PRINTS Expansin/Lol pI family signature 28 43 IPR007118 GO:0005576
Mal8g1569 251 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Mal8g1569 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 159 IPR007112 -
Mal8g1569 251 Pfam Expansin C-terminal domain 160 237 IPR007117 -
Mal8g1569 251 Gene3D - 17 154 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1569 Mal-Chr8 30554402 30556644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1569 5 251 Expansin Gene Family AT2G40610 77.823 2.76e-143 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1569 - - gmx:100816848 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1569 8 30554402 30556644 Mal8g1569 8 30554402 30556644 ECH
Mal8g1569 8 30554402 30556644 Mal2g2958 2 40554922 40557656 ECH
Mal2g2958 2 40554922 40557656 Mal8g1569 8 30554402 30556644 PCT