Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1560 ATGGGGGTTGAAATTTGTATGAATAATTTGTGTAAGGATGGTTTAACTGGTGAATGGAAGAAAGGGTGGTGTTTGATCTCTGGTGGATTTGCCAAACTTTGCAACAAATGCGGACTTGACTATGAGAATTCAGTTTTCTGTGATAAATTCCACCGTCATGAAACAGGATGGAGGAAATGCAACAGTTGCAATAAGCCTGTCCACTGTGGATGTATAGTGTCAAAGTCTTTGTTCGAGTACCTTGATTTTGGTGGTATAGGTTGTGTTACCTGTGTTAAGCCCTCCCAGCTTTGTCCGGATACTGAAAATCATAATAGGTTTTCTCAATCGACCGAAAACAATGCAAGTGATCGATATGCTGAACATATTGATAGTAGACTAGCAGTGGATCGAGCAGGCAAAGGAAGCCTTATGCAGTTGTGTAGAATGGCTGAAGCTGGTGAATCAAGCTTTTGGCCAAGAGCTCAAAGAGAGGGCATGGTTTCAAGTATTGGTCCAAAAACCGAACAAGTTAACTGTCAATTAAACAAAGAGGATACAGGATTTTTAAATGTGATGAAACATTCTAGTCATTTTTCGACACTTACTACATCGGAAAATACTAGACCAACATGGGAGACTAAAAGTATAGATGAATCACTTTCGCTGAAGATTTCTCTTGGAACCTCGTCAAGAAATTGTGTTATGCCTTCTGCGACAGAGATTGTAGAAGGTAAACTTGAGGGTAAAGCATCTTCTCTTTTTCAACAAGGGCAAAAATTTCACGCTATATTGGCGCAACAATCGAAGAATGGGATTACCATGAATCTTGAAACAAATAAAGGCATGACCTCTCATGCACGCATAGGCCGGCCACCTGCTGATGTCAAAGGTAAAAATCAGTTACTTTCTCGATACTGGCCAAGGATTACTGATCAAGAGCTGGAGAAATTGTCTGGGGATTTGAAGTCTACTGTAGTGCCCTTATTTGAGAAGGTGTTAAGTCCGAGTGATGCAGGTAGAATTGGTCGTCTTGTTCTCCCAAAAGCGTGTGCTGAGGCTTATCTTCCTCGTATTTTGCAATCAGAAGGTGTTCCTTTACAGTTCCAAGATATAATGGGGAACGAGTGGACTTTTCAGTTCAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGTCCTTGCAATTAAATGCTGGTGATACTGTGACATTTAGTCGGATAGATCCTGGGAAAAAATTTCTATTTGGTTTTAGAAGGTCAATGAATTCTACTGTTATGCAGGATGCCTCCACATCTTCTCATTCTAATGGCGTTTCTACAAAGGATACAAACTTTTCCGGTGCACCTAAGAATGTGAACTCGTTAGGTAGTTTTTCTGATCTTCTTCAATCAATGAAAGGTAACGGGGAACCTTACTTAAACGGACATTCAGAACATCTGCGTTTGGGTAATGGAACTGCTGATTGGCTTAAAACTGCACATAGTGAGGAGGAAATGAACAATAGTCCATTGCAGCAACTGGTTTCTGAGAAGAAGAGGTCTCGCAATATTGGGACGAAAACTAAGAGGCTGCACATTCATAGTGAAGATGCTATGGAATTGAGACTTACGTGGGAAGAAGCACAAGAATTTCTTTGTCCGCCGCCTAGTGTCAAGCCAAATATTGTAACAATCGAGGACCAAATATTTGAAGAATATGATGAACCCCCGGTTTTCGGAAAGAGAACTATAACCAGTGTCTCTCCATCAGGGTCTTCAGGTTCTGCATCAGAGCAGCTCGGGCCAAAGGAACAAGAAAATCTTCAGAGAACCAGAAAAGATTCTAAAAAGCGGAAAACTTCAGAAAAGAGCAAGTCAATTCAAGAACACGAGTTTTCAGGCCTAGATGCTCTTGCCAATGCAGCAGTTTTAGGCAATAATCTTGCTGACCCTGACGAGTCGTCGTCAGCTGGAGTGACCACAAAACATCCGAGGCATCGTCCTGGATGCGTTTGTATCGTGTGCATTCAACCACCAAGTGGACAAGGAAAACATGACCCGACATGCACTTGCCTTGCCTGTGAGACTGTGAAGCGCCGGTTCAAGACCCTTATGATGCGTAAGAAGAAAAACCAATTAGAATCTGAAGCAGTTGCTGACCAAAGCAATCAAATGAATCATAGAGATGAAGCAGGTACTAGTGGTGGTGCATCGAGACAAGATACAAGTCACTCAACGGACGAGGGAAGCCTAAACGGAGGTCAGCTTGAGGTTGTTGAGCCGAGTGCCGCGGGACAATTGGATTTGAATTGTCATCCCAATCATGAAGATATGGAAATTGATACATATAACAGGACTGAGCAATGA 2355 0.4217 MGVEICMNNLCKDGLTGEWKKGWCLISGGFAKLCNKCGLDYENSVFCDKFHRHETGWRKCNSCNKPVHCGCIVSKSLFEYLDFGGIGCVTCVKPSQLCPDTENHNRFSQSTENNASDRYAEHIDSRLAVDRAGKGSLMQLCRMAEAGESSFWPRAQREGMVSSIGPKTEQVNCQLNKEDTGFLNVMKHSSHFSTLTTSENTRPTWETKSIDESLSLKISLGTSSRNCVMPSATEIVEGKLEGKASSLFQQGQKFHAILAQQSKNGITMNLETNKGMTSHARIGRPPADVKGKNQLLSRYWPRITDQELEKLSGDLKSTVVPLFEKVLSPSDAGRIGRLVLPKACAEAYLPRILQSEGVPLQFQDIMGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSLQLNAGDTVTFSRIDPGKKFLFGFRRSMNSTVMQDASTSSHSNGVSTKDTNFSGAPKNVNSLGSFSDLLQSMKGNGEPYLNGHSEHLRLGNGTADWLKTAHSEEEMNNSPLQQLVSEKKRSRNIGTKTKRLHIHSEDAMELRLTWEEAQEFLCPPPSVKPNIVTIEDQIFEEYDEPPVFGKRTITSVSPSGSSGSASEQLGPKEQENLQRTRKDSKKRKTSEKSKSIQEHEFSGLDALANAAVLGNNLADPDESSSAGVTTKHPRHRPGCVCIVCIQPPSGQGKHDPTCTCLACETVKRRFKTLMMRKKKNQLESEAVADQSNQMNHRDEAGTSGGASRQDTSHSTDEGSLNGGQLEVVEPSAAGQLDLNCHPNHEDMEIDTYNRTEQ* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1560 784 MobiDBLite consensus disorder prediction 712 748 - -
Mal8g1560 784 MobiDBLite consensus disorder prediction 768 784 - -
Mal8g1560 784 Pfam B3 DNA binding domain 323 422 IPR003340 GO:0003677
Mal8g1560 784 MobiDBLite consensus disorder prediction 579 600 - -
Mal8g1560 784 SUPERFAMILY DNA-binding pseudobarrel domain 321 424 IPR015300 -
Mal8g1560 784 MobiDBLite consensus disorder prediction 705 784 - -
Mal8g1560 784 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 588 - -
Mal8g1560 784 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 588 779 - -
Mal8g1560 784 ProSiteProfiles B3 DNA-binding domain profile. 323 424 IPR003340 GO:0003677
Mal8g1560 784 Gene3D - 301 427 IPR015300 -
Mal8g1560 784 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 3 588 - -
Mal8g1560 784 MobiDBLite consensus disorder prediction 570 628 - -
Mal8g1560 784 CDD B3_DNA 321 422 IPR003340 GO:0003677
Mal8g1560 784 SMART B3_2 323 424 IPR003340 GO:0003677
Mal8g1560 784 MobiDBLite consensus disorder prediction 601 626 - -
Mal8g1560 784 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 588 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1560 Mal-Chr8 30444986 30450014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1560 1 783 B3 DNA Binding Superfamily AT2G30470 42.080 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal8g1560 B3 3.6e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1560 - - lang:109356710 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2994 2 41416274 41423778 Mal8g1560 8 30444986 30450014 PCT