Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1548 ATGACAGAGATTACATTGAATTCAATTGTCAATATCTTATACCTTACACTAAAAAAACTCTCCATGAAATTTTTCTCACCATTGCATGCTTTTCTTTTTATCATTGTTATTCTTTCTCCTCTTGTTTTTGCTGACCTGAATTCCGATAAGCAAGCCCTTCTGGATTTTGCTTCTGCCATCCCTCATCGTCGCAACCTTAAGTGGGACCAAGCTACCTCAATATGTACATCTTGGATAGGCATCACTTGCAATCCAAACAGTACTCGTGTAGTTTCTGTCCGGCTCCCTGGAGTCGGACTAGTAGGCACCATTCCATCCAATACACTCGGCAAACTTGACTCACTTAAAACTATTAGCCTTCGCTCAAACCTACTCAGTGGAAGTATACCTCATGATATTACTTCTCTTCCGTCTCTACAATATCTCTACCTCCAACATAATAACCTTTCTGGTGAATTACCAACATCATTGCCGTCGCAACTCAATGCACTTATTTTGTCATACAATTCTTTCACCGGTAGCATTCCGAAGACATTGCAAAACTTAACACAACTAACTCGATTAAGCCTTGAGAACAACTCCTTATCTGGACCGATACCTGATCTCCATGTAAACCTCAAACAATTGAATTTGAGCTACAACCATTTGAATGGATCAATCCCTTCATCTCTTCGTAGTTTCTCAAGTTCTTCCTTTGAAGGGAACTCTCTCTTATGTGGATTACCTCTAAAGTCATGCTCCGTAGTCCCTCCACCATCGCCTCCTCCTGCATTGGCTCCTGTAAGACACGTCTCGAAAAATAAACTGAGTAAAGGAGCTATCATTGCAATTGCTGTTGGTGGAGCTGTTCTGTTGTTTTTCATAGCTCTTGTCATTGTTCTTTGTTGTTTAAAGAAAAAAGATAACGGAACCTCTAGAGCAGTTAAAGCCAAAGGTCCTAGTGGTGGTGGTGGAAGGACTGAAAAGCCGAAAGAAGAGTTTGGAAGTGGAGTGCAAGAATCTGAGAGAAACAAATTGGTTTTCTTTGAGGGATGCTCTTACAATTTCGATCTCGAGGATTTGTTGAGAGCTTCGGCTGAGGTTCTTGGAAAGGGTAGTTATGGTACTGCATATAAGGCTATCTTGGAGGAGGCAACGACTGTTGTAGTCAAAAGGTTGAAAGAAGTTGTGGTTGGCAAGAGGGAATTTGAACAGCAGATGGAGATTGTTGGAAGCATTGGAAATCACCCGAATGTCGTTCCGCTTCGCGCTTATTATTATTCAAAGGATGAGAAGCTTTTAGTTTGTGACTATTTCCCAAATGGCAATCTATCTATACTCTTGCATGGTACTAGGACAGGCGGAAGAACTACTTTAGATTGGAACACGCGAGTAAAAATCTCTCTCGGAATTGCTAGAGGAATTGCTCATTTACATTCAGTTGGTGGTCCAAGATTCACACATGGAAATGTGAAATCCTCCAATGTCCTCCTGAACCAAGATAACGATGGCTGTATTTCCGATTTCGGCCTGACGCCACTCATGAACATTCCTGCGACCCCTTCTAGAACCGCAGGCTACCGTGCTCCCGAGGTAATTGAGACTCGGAAGCACACTCATAAATCAGATGTTTACAGTTTTGGTGTCCTTCTTTTGGAAATGCTTACAGGTAAAGCGCCACAACAGTCTCCCGTTCGTGATGACATGGTTGATCTCCCAAGATGGGTTCAGTCCGTTGTTAGGGAGGAGTGGACCGCCGAGGTTTTTGATGTGGAGCTAATGAGGTACCAAAATATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGGCATGGCTTGTGTCGCGAAGGTTCCGGATATGAGGCCTAACATGGAGGAAGTAGTGAGAATGATTGAAGAAATTCGGCAATCTGACTCGGATAACCGGCCGTCTTCTGATGATAATAAATCCAAGGATTTAAATGTTCAAACTCCATGA 1956 0.4243 MTEITLNSIVNILYLTLKKLSMKFFSPLHAFLFIIVILSPLVFADLNSDKQALLDFASAIPHRRNLKWDQATSICTSWIGITCNPNSTRVVSVRLPGVGLVGTIPSNTLGKLDSLKTISLRSNLLSGSIPHDITSLPSLQYLYLQHNNLSGELPTSLPSQLNALILSYNSFTGSIPKTLQNLTQLTRLSLENNSLSGPIPDLHVNLKQLNLSYNHLNGSIPSSLRSFSSSSFEGNSLLCGLPLKSCSVVPPPSPPPALAPVRHVSKNKLSKGAIIAIAVGGAVLLFFIALVIVLCCLKKKDNGTSRAVKAKGPSGGGGRTEKPKEEFGSGVQESERNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAILEEATTVVVKRLKEVVVGKREFEQQMEIVGSIGNHPNVVPLRAYYYSKDEKLLVCDYFPNGNLSILLHGTRTGGRTTLDWNTRVKISLGIARGIAHLHSVGGPRFTHGNVKSSNVLLNQDNDGCISDFGLTPLMNIPATPSRTAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPQQSPVRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIGMACVAKVPDMRPNMEEVVRMIEEIRQSDSDNRPSSDDNKSKDLNVQTP* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1548 651 Pfam Protein kinase domain 359 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1548 651 MobiDBLite consensus disorder prediction 305 331 - -
Mal8g1548 651 SUPERFAMILY L domain-like 60 245 - -
Mal8g1548 651 PANTHER OS05G0588300 PROTEIN 22 651 - -
Mal8g1548 651 PANTHER LRR RECEPTOR-LIKE KINASE 22 651 - -
Mal8g1548 651 Gene3D Ribonuclease Inhibitor 160 203 IPR032675 -
Mal8g1548 651 Gene3D Ribonuclease Inhibitor 47 159 IPR032675 -
Mal8g1548 651 ProSiteProfiles Protein kinase domain profile. 356 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1548 651 MobiDBLite consensus disorder prediction 626 642 - -
Mal8g1548 651 Gene3D Phosphorylase Kinase; domain 1 324 431 - -
Mal8g1548 651 Pfam Leucine rich repeat N-terminal domain 47 84 IPR013210 -
Mal8g1548 651 MobiDBLite consensus disorder prediction 626 651 - -
Mal8g1548 651 ProSitePatterns Protein kinases ATP-binding region signature. 362 393 IPR017441 GO:0005524
Mal8g1548 651 CDD STKc_IRAK 362 627 - -
Mal8g1548 651 Gene3D Ribonuclease Inhibitor 206 247 IPR032675 -
Mal8g1548 651 Pfam Leucine rich repeat 103 149 IPR001611 GO:0005515
Mal8g1548 651 Gene3D Transferase(Phosphotransferase) domain 1 432 650 - -
Mal8g1548 651 SUPERFAMILY Protein kinase-like (PK-like) 360 634 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1548 Mal-Chr8 30130389 30132648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1548 28 649 Receptor kinase-like Gene Family AT5G58300 68.088 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal8g1548 Pkinase 9.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1548 - - gmx:100818344 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1548 8 30130389 30132648 Mal8g1548 8 30130389 30132648 ECH
Mal2g3016 2 41978001 41980379 Mal8g1548 8 30130389 30132648 PCT