Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1535 ATGGTAGCAGGTATACTGGCCTACAAATTTGGAGCACCTTTTGCGTGGATTACTTCTCTGTCAGTTGCTGCTTATGTTGTTTTTACACTTTCTATCACACAGTGGAGGACTAAATTCAGGAAAGCCATGAATAAAGCTGATAATGACGCTAGTACTAGGGCTATTGATTCACTTATTAATTATGAGACGGTCAAATATTTCAATAATGAAGTTCATGAAACTGATCATTATGACAAGTACCTAAAGAGGTATGAGGATGCTGCTCTGAAAGGCGAACAGAGTCTTGCTTTGTTGAACTTCGGTCAAAATGCTATATTTAGTACTTCTCTTTCAATAGCAATGGTTCTGTGTTCTCATGGGATCATGGATGGCACAATGACCGTTGGTGATTTGGTGATGGTAAATGGGCTTCTCTTCCAACTATCTCTTCCACTCTATTTCCTTGGTGGTGTTTATCGTGCAACTATACAAAGTCTAATTGACATGAAATCCATGTTCCAGTTACTTGAGGTAAAAGCAGACATTAAGGATAAAGAAAATGCAAAGCCTCTAAGATTTAATGGGGGAAAAATCCAATTTGAGAATGTACATTTTAGTTACCTCACAGAAAGAAAGATACTAGATGGAATATCACTACTTGTGCCAGCTGGTAAAAGTGTTGCAATTGTTGGGACTAGTGGAAGTGGAAAATCAACCATTCTCAGAATGCTATTCAGATTTTTTGATCCCCATTCTGGAAGTATAAAGATAGATGATCAAGATATTCGGGATGTAACCCTTGAGAGTTTACGGAAATCTATTGGTGTTGTTCCACAAGATACTGTACTTTTCAATGATACAATATTTCATAACATTCACTACGGTCGGCTTTCAGCAACAGAAGAGGAGGTCTATGAAGCTTCCCGGAAAGCAGCAATCCATGACACTATCACGAGTTTTCCTGAGAAATACTCCACTGTTGTGGGAGAGCGAGGGCTAAAGTTAAGTGGTGGTGAGAAGCAACGTGTTGCCCTTGCTCGGGCATTCTTAAAAGCACCTGCAATACTGTTGTGTGATGAAGCTACAAGTTCTCTAGACAGCACAACAGAAGCAGAGATTTTAAGTGCATTGAAGTCAGTATCAGATAATCGAACTTCCATATTCATTGCTCACAGGCTCACCACTGCAATGCAGTGTGATGAGATCATTGTTTTGGAAAATGGAAAGGTAGTTGAGCATGGACCACATGAAGTTCTGTTAGCAAATGCAGGAAGATATGCACAGCTTTGGGGACAGCAAAATAACACTATTGATGCAATTGACACAGCCATCAAAGTGGGAGCATAA 1326 0.3967 MVAGILAYKFGAPFAWITSLSVAAYVVFTLSITQWRTKFRKAMNKADNDASTRAIDSLINYETVKYFNNEVHETDHYDKYLKRYEDAALKGEQSLALLNFGQNAIFSTSLSIAMVLCSHGIMDGTMTVGDLVMVNGLLFQLSLPLYFLGGVYRATIQSLIDMKSMFQLLEVKADIKDKENAKPLRFNGGKIQFENVHFSYLTERKILDGISLLVPAGKSVAIVGTSGSGKSTILRMLFRFFDPHSGSIKIDDQDIRDVTLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATEEEVYEASRKAAIHDTITSFPEKYSTVVGERGLKLSGGEKQRVALARAFLKAPAILLCDEATSSLDSTTEAEILSALKSVSDNRTSIFIAHRLTTAMQCDEIIVLENGKVVEHGPHEVLLANAGRYAQLWGQQNNTIDAIDTAIKVGA* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1535 441 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 431 IPR039421 -
Mal8g1535 441 ProSitePatterns ABC transporters family signature. 328 342 IPR017871 GO:0005524
Mal8g1535 441 SMART AAA_5 216 402 IPR003593 -
Mal8g1535 441 SUPERFAMILY ABC transporter transmembrane region 3 172 IPR036640 GO:0005524|GO:0016021
Mal8g1535 441 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 157 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal8g1535 441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 426 IPR027417 -
Mal8g1535 441 CDD ABC_6TM_ATM1_ABCB7 1 165 - -
Mal8g1535 441 Pfam ABC transporter transmembrane region 5 144 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal8g1535 441 PANTHER BNAA10G12020D PROTEIN 1 431 - -
Mal8g1535 441 Pfam ABC transporter 207 356 IPR003439 GO:0005524
Mal8g1535 441 Gene3D ABC transporter type 1, transmembrane domain 1 181 IPR036640 GO:0005524|GO:0016021
Mal8g1535 441 Gene3D - 183 437 IPR027417 -
Mal8g1535 441 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 191 425 IPR003439 GO:0005524
Mal8g1535 441 CDD ABCC_ATM1_transporter 191 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1535 Mal-Chr8 29716725 29728302 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1535 37 422 Calmodulin-binding Proteins AT2G36910 36.816 2.30e-68 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1535 K05662 - gmx:100787870 779.63