Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1513 ATGATTGAGAGGGAAAGGGTTTCTTTGAATAAGATTAAATATCTTGCTTTGGATGAGGCTGATCGAATGTTGGACATGGGTTTTGAGAATCAGATTCGCAATATTGTGCAGCAGATGCATATGCCTCCTCCTGGTGATACACAGATTCTGCTTTTCAGTGCTACCTTTCCGGATAATATACAGTTTGTTGCTTACTGCGAAAGCTTGCATCTGATTTTTTTATCAAACTATGTTTTCCTGGCTGTTGGAAGGGTTGGTTCAAGCACTGAGCTGATTGTACAGAAAGTTGAATTTGTACAGGATATGGAGAAAAGGAATCGTCTTGTGGATCATCTCCGGTGCAATGTAGTCAATGGGAAACTTCCTTTAACTCTTGTGTTTGTTGAAACAAAGAAAGGAGCTGATGCTTTAGAAAACTGGTTAGGTAGAAGTGGCTTTCCAGCTATTGCGATACATGGTGACAAAGTTCAAATGGAGTTTAAAAATAACATTTTGGAACCAGGATTAGTAGAACATATTGTTGTCTCCAACACACCAGTTGCCAAAATATATGCGAGGAACTCTCATTATCCTAATTATGGAGTATGGAATGTGAGAGTCAAAGGAAACAAAGCAAATGTTGCAGAGCCAGAAGTTAGCAGACTTTACATAGAGGTTGAAGAATTCATTTTTATGAGAAACCACTCTGACTGA 693 0.3867 MIERERVSLNKIKYLALDEADRMLDMGFENQIRNIVQQMHMPPPGDTQILLFSATFPDNIQFVAYCESLHLIFLSNYVFLAVGRVGSSTELIVQKVEFVQDMEKRNRLVDHLRCNVVNGKLPLTLVFVETKKGADALENWLGRSGFPAIAIHGDKVQMEFKNNILEPGLVEHIVVSNTPVAKIYARNSHYPNYGVWNVRVKGNKANVAEPEVSRLYIEVEEFIFMRNHSD* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1513 230 Gene3D - 94 167 IPR027417 -
Mal8g1513 230 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 74 IPR014001 -
Mal8g1513 230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 159 IPR027417 -
Mal8g1513 230 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 160 - -
Mal8g1513 230 Gene3D - 1 93 IPR027417 -
Mal8g1513 230 Pfam DEAD/DEAH box helicase 2 61 IPR011545 GO:0003676|GO:0005524
Mal8g1513 230 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 37-LIKE ISOFORM X1 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1513 Mal-Chr8 29197942 29199486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1513 1 159 Eukaryotic Initiation Factors Gene Family AT3G19760 31.250 8.06e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1513 K11594 - gmx:100817549 220.705