Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1485 ATGAATAGCAGCTCCGTTCCTATGGAAATATTCATAAATGTCATGTATGGTGGGAATAGGTTCCCCCTGATGGTTAAGAGTTCAGACACGATACTGAGTGTGAAGGTAAAGATTTCTGACGAGGAAGGGATCCCAGTGCACCAACAACGTCTCTTCTTTGACGGTAAGCCAGTAGACGACCGCAAGACCCTTGCCCATTACAATATCCAAGAGAAGTCAACCATTGATGCTAAAGATCCTCTAAGATTATTTCACCTCAGATTCAATGCCATAGCGGACTAG 282 0.4397 MNSSSVPMEIFINVMYGGNRFPLMVKSSDTILSVKVKISDEEGIPVHQQRLFFDGKPVDDRKTLAHYNIQEKSTIDAKDPLRLFHLRFNAIAD* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1485 93 PRINTS Ubiquitin signature 19 39 IPR019956 -
Mal8g1485 93 PRINTS Ubiquitin signature 61 82 IPR019956 -
Mal8g1485 93 PRINTS Ubiquitin signature 40 60 IPR019956 -
Mal8g1485 93 ProSiteProfiles Ubiquitin domain profile. 8 75 IPR000626 GO:0005515
Mal8g1485 93 Gene3D - 5 78 - -
Mal8g1485 93 SMART ubq_7 8 80 IPR000626 GO:0005515
Mal8g1485 93 Pfam Ubiquitin family 10 75 IPR000626 GO:0005515
Mal8g1485 93 PANTHER UBIQUITIN 8 76 - -
Mal8g1485 93 PANTHER POLYUBIQUITIN 8-RELATED 8 76 - -
Mal8g1485 93 SUPERFAMILY Ubiquitin-like 8 76 IPR029071 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1485 8 75 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 54.412 1.68e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1485 - K02927 mtr:MTR_5g076740 100.138