Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1482 ATGTCTCCGCCTCAGCCACCCCGCGTCGACCCCAAAATCTGGCAGCTATGCGCCGGCCCCTCTGCCAAGATTCCAAAGATTCATTCAAAAGTTTACTACTTCCCACAAGGTCACTTGGAACATGCCTGCTCTTTCCCTAACTCTTCCGTTCTTGTTGGTTACCCTCCTTCCATTCCATGCATCGTCTCAGCCGTTGATCTCCTTGCTGATCCTCACACCGACGAGATCTTTGCCAAACTGCTCGTCACTCCCGTAACTGTCGACTGCAGTGTCCAAGAACCTTCTCTCGAGGTTCTGGACCAAGAAGATGATGGTGATGAGGTTGTTTCTTTTGTCAAGATTCTTACACAATCCGATTCTAATAGCAGTGCATTCCCCGTACCTCGCCAATGCGCTGAGTTGATCTTCCCCAAGCTTGACTTACAGGCTCCTTTGCCGTCTCAGAAACTCCTTGTCACCGACGTTCAAGACAAAGTCTGGGAGTACACTCATAGCTATCGTGGAAATCCCAAGAGACACATGTTAACTACTGGCTGGAGTTCTTTTGTGAGCAAGAAGAAACTCGTTGTCGGCGATTCTCTTGTTTTCATAAAAAACTCAGCAGGAAAGGTAGTTGTTGGAATCCGACGGAACATGAAGTTCACTGCAGCACAACAGAAGGAGGAGGAGGGTAAAAAGGGTCGGTTGGAGTTGGTGGAGGGAGAGGGTTTTTTGAGGAGCAGTAAAAAGGAGATGTTAACCGAGAAGGCGGTTATGGATGCGGTGGAATTGGCAGAGAAGAATACAGCGTTTGAAGTTGTGTATCATCCGAGGCCTAATTGTTGTGATTTTGTAGTGGATGCAAATGTTGTGGATGATTCTATGAAGATTGGTTGGGCATCTGGGATGAGGGTGAAGCTTCCTATGAAGAAAGATAAGTCTTCAAATTCAAAGACAACACTGTATCATCCTCAGGCGACAATCTCAAATGTGTCTAGTGTCCCTAATTGGCGCATGCTTGAGGTTAATTGGGATGAACCTGAAATCTCGCAAAGTCCAAACCGTGTCAATCCTTGGCAAGTTGAACTTATTTCCCACACACCTACAATGTATCAACCATTCCCCTCAATGAAAAAGCCTAGAGTATCCCAGGATTCCACCTTAACTAGTGATAAAAAGGGAAATTCCCTCATTCCTTTTTTAACAATAGAATCTTTGAAAGAAACATTGTGGAACCAGGGAGCCAGGCATGATTGTTTATCTGATTCAGGCTCTTCCAACTCTTTGAATGATGAGAGCAATCCAATGGCAGGGTTGAGTACTGCGTCAACCAGTCTAGACATTGGCAGACCTACATCTAATGACCCGTCGGCTCATGACCATAGTAATTTGAACACTTTTGGGACAACGTTGGTTGAGACCAACAACAATGCAAAAAGTGTTAATCCTCCTGGTTCAATTAAGTTATTTGGTAAGATCATACATCCTGTCAAAAGCAATGTTCATGATTCTGGTATTGAAGACAAGTAG 1509 0.4493 MSPPQPPRVDPKIWQLCAGPSAKIPKIHSKVYYFPQGHLEHACSFPNSSVLVGYPPSIPCIVSAVDLLADPHTDEIFAKLLVTPVTVDCSVQEPSLEVLDQEDDGDEVVSFVKILTQSDSNSSAFPVPRQCAELIFPKLDLQAPLPSQKLLVTDVQDKVWEYTHSYRGNPKRHMLTTGWSSFVSKKKLVVGDSLVFIKNSAGKVVVGIRRNMKFTAAQQKEEEGKKGRLELVEGEGFLRSSKKEMLTEKAVMDAVELAEKNTAFEVVYHPRPNCCDFVVDANVVDDSMKIGWASGMRVKLPMKKDKSSNSKTTLYHPQATISNVSSVPNWRMLEVNWDEPEISQSPNRVNPWQVELISHTPTMYQPFPSMKKPRVSQDSTLTSDKKGNSLIPFLTIESLKETLWNQGARHDCLSDSGSSNSLNDESNPMAGLSTASTSLDIGRPTSNDPSAHDHSNLNTFGTTLVETNNNAKSVNPPGSIKLFGKIIHPVKSNVHDSGIEDK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1482 502 MobiDBLite consensus disorder prediction 364 384 - -
Mal8g1482 502 MobiDBLite consensus disorder prediction 413 458 - -
Mal8g1482 502 PANTHER AUXIN RESPONSE FACTOR 5 499 - -
Mal8g1482 502 Pfam B3 DNA binding domain 111 211 IPR003340 GO:0003677
Mal8g1482 502 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 5 499 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal8g1482 502 ProSiteProfiles B3 DNA-binding domain profile. 110 212 IPR003340 GO:0003677
Mal8g1482 502 Gene3D - 292 362 - -
Mal8g1482 502 SMART B3_2 111 212 IPR003340 GO:0003677
Mal8g1482 502 CDD B3_DNA 110 210 IPR003340 GO:0003677
Mal8g1482 502 SUPERFAMILY DNA-binding pseudobarrel domain 106 210 IPR015300 -
Mal8g1482 502 Pfam Auxin response factor 254 326 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal8g1482 502 Gene3D - 108 212 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1482 Mal-Chr8 28398550 28400397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1482 9 487 B3 DNA Binding Superfamily AT1G77850 37.262 1.68e-98 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal8g1482 B3 1.3e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1482 - - cam:101503141 417.542