Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1471 ATGGCACCTGTTTCATTGCCTCCAGGTTTCAGGTTCCACCCTACAGATGAAGAACTTGTTGCCTATTATCTAAATAGGAAGATCAATGGCCATAAGATTGAATTGGAGATCATAGCTGAAGTTGATCTCTATAAGTGTGAACCGTGGGACTTGCCAGGGAAATCATTATTACCTGGGAATGATATGGAATGGTATTTCTTTAGCCCTCGTGATAGGAAATACCCAAATGGATCAAGAACGAACCGTGCAACCAAATCTGGATATTGGAAGGCAACCGGAAAGGATCGAAAAGTGAATTCTCAAGCTCGAGCAGTAGGTGTGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCACCCCATGGCTCTCGTACAAATTGGGTTATGCATGAATATCGTCTTGATGAGAGGGAATGTGAAACCAATCCTAGCTTACAGGATGCATATGCTCTTTGCCGTGTGATCAAGAAGAATACAGTGATTGTGCCAAAAGTTGGAGGACAATATGGTAATATTACAAGCCATGCCAACCAGATAACAAGCGACCAATCATCAAGAGTTGAGCTATATTCTCAAAGAAGGGGTGAAGATTTAGATAGTTCAAATTATTTGATGCAAATGAAAGCTTGTTCACCTCACAATATGGTAAATGAGACTTCTCTCAATAGCAATGGTAGGACAAGGGATCATGGGAATTGGTCGCAATTCTCATCTGAAGACCCATTATTTAGTCTTCCAACAACTTCTTCATTTACTAATTATGGAGCCATAACATACCCTCCATCCAAGGTGGATATTGCACAAGAGTGTGCAAGGATGCAACATAGGTTTACTATGCCTCCATTAGAGGTGGAGGACTTTCCTCAAGTTGGAATACCTCATCTTAACATCATGACACAACAAGGAAGCAGAACTAAAAATGATATCTTGCAGGAAATTCTTTCACTTACTCATACTTCTCATGAATTGATGAATCACTCCAGTTATCCACAAGCCTTGGATGACAATGAAAATCATGCTCCTTATTATGAAGATGATTTTACTTTCATGGTTGGTACTAACTACAATCACATAAATGATATGAGCTCCATGAGATATGTTGACAAAACTTGGGAAGATTTGAATACAAGATCTATAGAGATAGGTGATCTAGAGGATCAAGAGTTAAAGGCCAAGCGGATGGTAGAGAATTTGAGATGGATTGGAATGCCAAGAGAAGATTTTGAAAAGATGGAAGAACAAAATGTTGTCCCAATCGAGAATATTTCATGCTTCCAAGCATTAAGGGAACACAATGGCATCCAAGAATATGAGCGGCACAATAACAACTTTGAACAAAATGACAATGATGTCAATGAATTTTCATGGGGATTCATCAATGATGGTGACCCCAATGAGAATTTCATAGAAGATGATAACATGGATGATTACTCAAATTCTCCAAGCTTTGAGATCATTGAGGAAATAAAGGTTAGTCATGGAATGTTGGTTTCAACTCAACAAGTAGCCATGACATTATTTCACCAAGTTGTTCCATCACAAACACTTCAAATTCAACTCAACCCAATGATGCCAAACAATAAACACTCTATAGAAAATGTAGAGGCAATGATGATGATAATGGAGAATCAAGGATCTTTCTTTAGGAAGTTCAAGGCCTATGTGATGGGGAAGTGGAACCTATTCAATCCATCAAAGAAAATAGCAAGTTTGGTTGTATTAGTATTTGCACTTTTGATGCATTGTGTTTATTTGGAGGAAGAAGTGGAAATCTGCAAACCAAAACCAAAAAATGTGAAAGTGAAAAGAATGAGAGAATCATATGAGAGAGTCAAATGGAATGAGTCAAAAGAGGTTTGGTTTGTTAGTGTTAAAAGTGAGAAAGGATTAAGTGTGGTCTTGAAGAAAATAGGCATATTCCTCACCATATTTTTGGCGCTTTGTACCACGTGGGCTAGCCATAGTTAA 1965 0.3822 MAPVSLPPGFRFHPTDEELVAYYLNRKINGHKIELEIIAEVDLYKCEPWDLPGKSLLPGNDMEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQARAVGVKKTLVYYRGRAPHGSRTNWVMHEYRLDERECETNPSLQDAYALCRVIKKNTVIVPKVGGQYGNITSHANQITSDQSSRVELYSQRRGEDLDSSNYLMQMKACSPHNMVNETSLNSNGRTRDHGNWSQFSSEDPLFSLPTTSSFTNYGAITYPPSKVDIAQECARMQHRFTMPPLEVEDFPQVGIPHLNIMTQQGSRTKNDILQEILSLTHTSHELMNHSSYPQALDDNENHAPYYEDDFTFMVGTNYNHINDMSSMRYVDKTWEDLNTRSIEIGDLEDQELKAKRMVENLRWIGMPREDFEKMEEQNVVPIENISCFQALREHNGIQEYERHNNNFEQNDNDVNEFSWGFINDGDPNENFIEDDNMDDYSNSPSFEIIEEIKVSHGMLVSTQQVAMTLFHQVVPSQTLQIQLNPMMPNNKHSIENVEAMMMIMENQGSFFRKFKAYVMGKWNLFNPSKKIASLVVLVFALLMHCVYLEEEVEICKPKPKNVKVKRMRESYERVKWNESKEVWFVSVKSEKGLSVVLKKIGIFLTIFLALCTTWASHS* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1471 654 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Mal8g1471 654 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 370 - -
Mal8g1471 654 Coils Coil 652 654 - -
Mal8g1471 654 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Mal8g1471 654 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 370 - -
Mal8g1471 654 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Mal8g1471 654 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1471 Mal-Chr8 28136782 28142526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1471 1 648 NAC Transcription Factor Family AT1G65910 41.159 2.55e-150 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal8g1471 NAM 2.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1471 - - gmx:100809019 907.516