Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1467 ATGTTACTTACAACGTTCTTCTTTCTCATCACACTCTCTTCAACAACAACCGTTACCTCTCATTACTCTTCTTCCTCTTCTCAACCACCACCTTCTCAACCATCCTTCTCCGAATGGCGATCTGCACGTGCCACCTACTACGCCGCCATAGATCCACGTGACACAGTCGGTGGCGCGTGTGGCTACGGCGACCTAACCAAAGCAGGTTACGGTATGGCAACTGTTGGTCTTAGCGAAGCTTTGTTTGAACGAGGTCAGATCTGTGGCGCGTGCTTTGAATTAAAGTGTGTTGAGGATTTACGGTGGTGTATTCCTGGAACTTCGATTATTGTTACTGCGACGAATTTCTGTGCGCCGAATTATGGATTTACCGTTGAAGGTGGTGGACATTGTAATCCTCCTAATAAACATTTTGTTCTTCCTATTGATGCTTTTGAGAAGATCGCTATTTGGAAAGCTGGTAACATGCCTCTTCAGTATCGTAGGATAAAATGCAGAAGGGAAGGTGGAGTCCGATTTACAGTAACTGGTTCTGGTATCTTCATTTCAGTGCTGATCAGCAATGTTGCTGGCCATGGAGACATCATTGCGGTGAAGGTTAAGGGCTCAAGAACGGGTTGGCTTCCAATGGGTCGCAATTGGGGCCAAAACTGGCATATAAATGCGTTGCTACAGAATCAACCCCTTTCATTTGAGGTTACGAGTAGTGATGGGAAAACAGTTACGGCTTACAATGTTGCTCCCAAGGATTGGAGTTTTGGACAAACCTTTGAAGGCAAGCAATTTGATTATTAA 795 0.4516 MLLTTFFFLITLSSTTTVTSHYSSSSSQPPPSQPSFSEWRSARATYYAAIDPRDTVGGACGYGDLTKAGYGMATVGLSEALFERGQICGACFELKCVEDLRWCIPGTSIIVTATNFCAPNYGFTVEGGGHCNPPNKHFVLPIDAFEKIAIWKAGNMPLQYRRIKCRREGGVRFTVTGSGIFISVLISNVAGHGDIIAVKVKGSRTGWLPMGRNWGQNWHINALLQNQPLSFEVTSSDGKTVTAYNVAPKDWSFGQTFEGKQFDY* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1467 264 PANTHER EXPANSIN-A15 21 263 IPR002963 GO:0009664
Mal8g1467 264 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 180 259 IPR007117 -
Mal8g1467 264 SUPERFAMILY Barwin-like endoglucanases 38 188 IPR036908 -
Mal8g1467 264 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 57 170 IPR007112 -
Mal8g1467 264 Gene3D - 24 166 IPR036908 -
Mal8g1467 264 Pfam Lytic transglycolase 75 160 IPR009009 -
Mal8g1467 264 PRINTS Expansin/Lol pI family signature 245 259 IPR007118 GO:0005576
Mal8g1467 264 PRINTS Expansin/Lol pI family signature 38 53 IPR007118 GO:0005576
Mal8g1467 264 PRINTS Expansin/Lol pI family signature 56 74 IPR007118 GO:0005576
Mal8g1467 264 PRINTS Expansin/Lol pI family signature 207 221 IPR007118 GO:0005576
Mal8g1467 264 PRINTS Expansin/Lol pI family signature 78 96 IPR007118 GO:0005576
Mal8g1467 264 PRINTS Expansin/Lol pI family signature 153 169 IPR007118 GO:0005576
Mal8g1467 264 PRINTS Expansin signature 109 119 IPR002963 GO:0009664
Mal8g1467 264 PRINTS Expansin signature 245 261 IPR002963 GO:0009664
Mal8g1467 264 PRINTS Expansin signature 96 107 IPR002963 GO:0009664
Mal8g1467 264 PRINTS Expansin signature 181 202 IPR002963 GO:0009664
Mal8g1467 264 PRINTS Expansin signature 128 145 IPR002963 GO:0009664
Mal8g1467 264 PRINTS Expansin signature 216 237 IPR002963 GO:0009664
Mal8g1467 264 PRINTS Expansin signature 169 181 IPR002963 GO:0009664
Mal8g1467 264 PRINTS Expansin signature 69 83 IPR002963 GO:0009664
Mal8g1467 264 PRINTS Expansin signature 145 158 IPR002963 GO:0009664
Mal8g1467 264 SUPERFAMILY PHL pollen allergen 167 259 IPR036749 -
Mal8g1467 264 PANTHER EXPANSIN-A13 21 263 - -
Mal8g1467 264 SMART dpbb_1 74 160 IPR007112 -
Mal8g1467 264 Gene3D - 170 262 IPR036749 -
Mal8g1467 264 Pfam Expansin C-terminal domain 171 248 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1467 Mal-Chr8 28057498 28059954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1467 38 263 Expansin Gene Family AT3G03220 84.071 4.94e-148 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1467 - - gmx:100809568 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3111 2 44135691 44138833 Mal8g1467 8 28057498 28059954 PCT